Orthogroup:group_582


Homologs in group_582

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_01670 FBDBKF_01670 Morganella morganii S1 copC copper homeostasis periplasmic binding protein CopC
EHELCC_02140 EHELCC_02140 Morganella morganii S2 copC copper homeostasis periplasmic binding protein CopC
NLDBIP_01320 NLDBIP_01320 Morganella morganii S4 copC copper homeostasis periplasmic binding protein CopC
LHKJJB_00715 LHKJJB_00715 Morganella morganii S3 copC copper homeostasis periplasmic binding protein CopC
HKOGLL_00755 HKOGLL_00755 Morganella morganii S5 copC copper homeostasis periplasmic binding protein CopC
F4V73_RS04010 F4V73_RS04010 Morganella psychrotolerans copC copper homeostasis periplasmic binding protein CopC
PMI_RS04895 PMI_RS04895 Proteus mirabilis HI4320 copC copper homeostasis periplasmic binding protein CopC

Distribution of group_582 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_582 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_582

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_582.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 copC 7

Product

# Product Occurence
1 copper homeostasis periplasmic binding protein CopC 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2372 7 P Inorganic ion transport and metabolism (P) Copper-binding protein CopC (methionine-rich)

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K07156 7 copper resistance protein C - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF04234 7 CopC domain

Annotations of the 7 SwissProt hits

Annotation Number of occurrences
Copper resistance protein C 3
Copper transport protein YcnJ 1
Protein YobA 3

Protein length

Min length 127
Max length 130
Mean length (sd) 127.4 (1.1)
Median length 127.0

Protein length distribution