Orthogroup:group_555


Homologs in group_555

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_01390 FBDBKF_01390 Morganella morganii S1 yfhL YfhL family 4Fe-4S dicluster ferredoxin
EHELCC_00155 EHELCC_00155 Morganella morganii S2 yfhL YfhL family 4Fe-4S dicluster ferredoxin
NLDBIP_03305 NLDBIP_03305 Morganella morganii S4 yfhL YfhL family 4Fe-4S dicluster ferredoxin
LHKJJB_04820 LHKJJB_04820 Morganella morganii S3 yfhL YfhL family 4Fe-4S dicluster ferredoxin
HKOGLL_02225 HKOGLL_02225 Morganella morganii S5 yfhL YfhL family 4Fe-4S dicluster ferredoxin
F4V73_RS02005 F4V73_RS02005 Morganella psychrotolerans - YfhL family 4Fe-4S dicluster ferredoxin
PMI_RS09295 PMI_RS09295 Proteus mirabilis HI4320 - YfhL family 4Fe-4S dicluster ferredoxin

Distribution of group_555 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_555 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_555

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_555.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 yfhL 5
2 - 2

Product

# Product Occurence
1 YfhL family 4Fe-4S dicluster ferredoxin 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2768 7 S Function unknown (S) Uncharacterized Fe-S cluster protein

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00037 6 4Fe-4S binding domain
PF12838 1 4Fe-4S dicluster domain

Annotations of the 55 SwissProt hits

Annotation Number of occurrences
4Fe-4S ferredoxin FdxA 1
Ferredoxin 12
Ferredoxin 7Fe 1
Ferredoxin Fdx2 1
Ferredoxin YfhL 1
Ferredoxin-1 6
Ferredoxin-2 2
Ferredoxin-3 1
Ferredoxin-like protein in nif region 8
Ferredoxin-like protein in vnf region 2
NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial 10
NADH dehydrogenase [ubiquinone] iron-sulfur protein 8-A, mitochondrial 1
NADH dehydrogenase [ubiquinone] iron-sulfur protein 8-B, mitochondrial 1
NADH-quinone oxidoreductase subunit I 5
NADH-ubiquinone oxidoreductase subunit 8 1
Uncharacterized ferredoxin-like protein HI_0527 1
Uncharacterized polyferredoxin-like protein MJ0514.2 1

Protein length

Unique protein length 86

Protein length distribution