Orthogroup:group_554


Homologs in group_554

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_01370 FBDBKF_01370 Morganella morganii S1 impG Type VI secretion system protein ImpG
EHELCC_00175 EHELCC_00175 Morganella morganii S2 impG Type VI secretion system protein ImpG
NLDBIP_03285 NLDBIP_03285 Morganella morganii S4 impG Type VI secretion system protein ImpG
LHKJJB_04800 LHKJJB_04800 Morganella morganii S3 impG Type VI secretion system protein ImpG
HKOGLL_02245 HKOGLL_02245 Morganella morganii S5 impG Type VI secretion system protein ImpG
F4V73_RS02305 F4V73_RS02305 Morganella psychrotolerans - type VI secretion system baseplate subunit TssF
PMI_RS03610 PMI_RS03610 Proteus mirabilis HI4320 - type VI secretion system baseplate subunit TssF

Distribution of group_554 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_554 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_554

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_554.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 impG 5
2 - 2

Product

# Product Occurence
1 Type VI secretion system protein ImpG 5
2 type VI secretion system baseplate subunit TssF 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3519 7 U Intracellular trafficking, secretion, and vesicular transport (U) Type VI protein secretion system component VasA

Pfam domain Annotation(s)

Domain ID Occurences Description
PF05947 7 Type VI secretion system, TssF

Annotations of the 1 SwissProt hits

Annotation Number of occurrences
Type VI secretion system component TssF1 1

Protein length

Min length 577
Max length 578
Mean length (sd) 577.1 (0.4)
Median length 577.0

Protein length distribution