Orthogroup:group_53


Homologs in group_53

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14 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_13345 FBDBKF_13345 Morganella morganii S1 arnT lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase
FBDBKF_13360 FBDBKF_13360 Morganella morganii S1 arnT lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase
EHELCC_08735 EHELCC_08735 Morganella morganii S2 arnT lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase
EHELCC_08750 EHELCC_08750 Morganella morganii S2 arnT lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase
NLDBIP_09060 NLDBIP_09060 Morganella morganii S4 arnT lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase
NLDBIP_09075 NLDBIP_09075 Morganella morganii S4 arnT lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase
LHKJJB_05190 LHKJJB_05190 Morganella morganii S3 arnT lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase
LHKJJB_05205 LHKJJB_05205 Morganella morganii S3 arnT lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase
HKOGLL_05710 HKOGLL_05710 Morganella morganii S5 arnT lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase
HKOGLL_05725 HKOGLL_05725 Morganella morganii S5 arnT lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase
F4V73_RS03400 F4V73_RS03400 Morganella psychrotolerans arnT lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase
F4V73_RS03415 F4V73_RS03415 Morganella psychrotolerans arnT lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase
PMI_RS01335 PMI_RS01335 Proteus mirabilis HI4320 arnT lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase
PMI_RS05090 PMI_RS05090 Proteus mirabilis HI4320 arnT lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase

Distribution of group_53 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_53 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_53

Orthogroup content: 14 members

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This page summarizes the annotation of all members of the orthologous group group_53.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 arnT 14

Product

# Product Occurence
1 lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase 14

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1807 14 M Cell wall/membrane/envelope biogenesis (M) PMT family glycosyltransferase ArnT/Agl22, involved in glycosylation of proteins and lipid IVA

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K07264 14 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43] Lipopolysaccharide biosynthesis
Cationic antimicrobial peptide (CAMP) resistance		 -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF02366 14 Dolichyl-phosphate-mannose-protein mannosyltransferase

Annotations of the 81 SwissProt hits

Annotation Number of occurrences
Uncharacterized protein aq_1220 1
Uncharacterized protein aq_1704 1
Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase 71
Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase 1 4
Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase 2 4

Protein length

Min length 548
Max length 565
Mean length (sd) 557.8 (6.6)
Median length 553.0

Protein length distribution