Orthogroup:group_499


Homologs in group_499

Help

7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_00930 FBDBKF_00930 Morganella morganii S1 csaA tRNA-binding protein
EHELCC_00615 EHELCC_00615 Morganella morganii S2 csaA tRNA-binding protein
NLDBIP_02845 NLDBIP_02845 Morganella morganii S4 csaA tRNA-binding protein
LHKJJB_04360 LHKJJB_04360 Morganella morganii S3 csaA tRNA-binding protein
HKOGLL_02685 HKOGLL_02685 Morganella morganii S5 csaA tRNA-binding protein
F4V73_RS06925 F4V73_RS06925 Morganella psychrotolerans - tRNA-binding protein
PMI_RS05010 PMI_RS05010 Proteus mirabilis HI4320 - tRNA-binding protein

Distribution of group_499 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_499 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_499

Orthogroup content: 7 members

Help

This page summarizes the annotation of all members of the orthologous group group_499.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 csaA 5
2 - 2

Product

# Product Occurence
1 tRNA-binding protein 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0073 7 J Translation, ribosomal structure and biogenesis (J) tRNA-binding EMAP/Myf domain

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K06878 7 tRNA-binding protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01588 7 Putative tRNA binding domain

Annotations of the 304 SwissProt hits

Annotation Number of occurrences
Aminoacyl tRNA synthase complex-interacting multifunctional protein 1 3
Methionine--tRNA ligase 283
Methionine--tRNA ligase 1 3
Methionine--tRNA ligase, cytoplasmic 2
Probable chaperone CsaA 1
Probable methionine--tRNA ligase 1
Probable methionine--tRNA ligase, cytoplasmic 1
Tyrosine--tRNA ligase, cytoplasmic 9
tRNA-binding protein YgjH 1

Protein length

Min length 113
Max length 117
Mean length (sd) 113.6 (1.5)
Median length 113.0

Protein length distribution