Homologs in group_4945
1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.
| Locus tag | Source | Gene | Product | |
|---|---|---|---|---|
| PMI_RS07060 | PMI_RS07060 | Proteus mirabilis HI4320 | betA | choline dehydrogenase |
Distribution of group_4945 homologs
Number of homologs in each genome (first column and blue bar chart)
This page summarizes the annotation of all members of the orthologous group group_4945.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.
Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used
to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.
| # | Gene name | Occurence |
|---|---|---|
| 1 | betA | 1 |
| # | Product | Occurence |
|---|---|---|
| 1 | choline dehydrogenase | 1 |
| ID | Occurences | Function(s) cat. | Function(s) descr. | Description |
|---|---|---|---|---|
| COG2303 | 1 | IR | Lipid transport and metabolism (I) General function prediction only (R) |
Choline dehydrogenase or related flavoprotein |
| KO | Occurences | Description | Pathways | Modules |
|---|---|---|---|---|
| K00108 | 1 | choline dehydrogenase [EC:1.1.99.1] | Glycine, serine and threonine metabolism One carbon pool by folate Metabolic pathways |
Betaine biosynthesis, choline => betaine |
| Annotation | Number of occurrences |
|---|---|
| (R)-mandelonitrile lyase 1 | 2 |
| (R)-mandelonitrile lyase 2 | 2 |
| (R)-mandelonitrile lyase 3 | 1 |
| (R)-mandelonitrile lyase 4 | 1 |
| (R)-mandelonitrile lyase-like | 1 |
| 4-pyridoxate dehydrogenase | 1 |
| 5-(hydroxymethyl)furfural oxidase | 1 |
| Alcohol dehydrogenase [acceptor] | 2 |
| Alcohol oxidase | 2 |
| Alcohol oxidase 1 | 2 |
| Alcohol oxidase 2 | 2 |
| Cellobiose dehydrogenase | 1 |
| Choline dehydrogenase, mitochondrial | 3 |
| Choline oxidase | 1 |
| Cyclase atC | 1 |
| Dehydrogenase | 1 |
| Dehydrogenase ARMGADRAFT_1018426 | 1 |
| Dehydrogenase GME11362 | 1 |
| Dehydrogenase citC | 1 |
| Dehydrogenase eriK | 1 |
| Dehydrogenase mpl7 | 1 |
| Dehydrogenase pkfF | 1 |
| Dehydrogenase pyvF | 1 |
| Dehydrogenase str4 | 1 |
| Dehydrogenase xptC | 1 |
| Ecdysone oxidase | 3 |
| Fatty acid photodecarboxylase, chloroplastic | 2 |
| GMC oxidoreductase family protein Mala s 12 | 1 |
| GMC oxidoreductase family protein Mala s 12.0101 | 1 |
| GMC-type oxidoreductase acuG | 1 |
| Glucose dehydrogenase [FAD, quinone] | 2 |
| Glucose oxidase | 3 |
| L-sorbose 1-dehydrogenase | 1 |
| Neither inactivation nor afterpotential protein G | 1 |
| Oxidoreductase cicC | 1 |
| Oxygen-dependent choline dehydrogenase | 118 |
| Oxygen-dependent choline dehydrogenase 1 | 1 |
| Paromamine 6'-oxidase | 1 |
| Patulin synthase | 2 |
| Protein HOTHEAD | 1 |
| Putative GMC-type oxidoreductase L128 | 1 |
| Putative GMC-type oxidoreductase R135 | 1 |
| Putative truncated GMC-type inactive oxidoreductase L894 | 1 |
| Putative truncated GMC-type inactive oxidoreductase R832 | 1 |
| Putative truncated GMC-type inactive oxidoreductase R833 | 1 |
| Pyranose dehydrogenase | 3 |
| Pyranose dehydrogenase 1 | 1 |
| Pyranose dehydrogenase 2 | 1 |
| Pyranose dehydrogenase 3 | 1 |
| Pyridoxine 4-oxidase | 1 |
| Sinalpyl alcohol oxidase Nec3 | 1 |
| Uncharacterized GMC-type oxidoreductase MT0511/MT0512 | 1 |
| Uncharacterized GMC-type oxidoreductase MT1316 | 1 |
| Uncharacterized GMC-type oxidoreductase Mb1310 | 1 |
| Uncharacterized GMC-type oxidoreductase Rv0492c | 1 |
| Uncharacterized GMC-type oxidoreductase Rv1279 | 1 |
| Uncharacterized GMC-type oxidoreductase in thcA 5'region | 1 |
| Versicolorin B synthase | 3 |
| Versicolorin B synthase stcN | 1 |
