Orthogroup:group_4877


Homologs in group_4877

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1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
PMI_RS12250 PMI_RS12250 Proteus mirabilis HI4320 - DEAD/DEAH box helicase

Distribution of group_4877 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of the RefSeq best hits of group_4877

Orthogroup content: 1 members

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This page summarizes the annotation of all members of the orthologous group group_4877.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 1

Product

# Product Occurence
1 DEAD/DEAH box helicase 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1205 1 L Replication, recombination and repair (L) ATP-dependent helicase YprA, contains C-terminal metal-binding DUF1998 domain

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K06877 1 DEAD/DEAH box helicase domain-containing protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00270 1 DEAD/DEAH box helicase
PF00271 1 Helicase conserved C-terminal domain
PF09369 1 MrfA Zn-binding domain

Annotations of the 15 SwissProt hits

Annotation Number of occurrences
ATP-dependent DNA helicase Hel308 3
ATP-dependent RNA helicase FAL1 2
ATP-dependent helicase HRQ1 1
ATP-dependent helicase hrq1 1
Activating signal cointegrator 1 complex subunit 3 1
Druantia protein DruE 1
Probable ATP-dependent helicase Lhr 1
Uncharacterized ATP-dependent helicase MJ0294 1
Uncharacterized ATP-dependent helicase MJ1574 1
Uncharacterized ATP-dependent helicase MTH_1802 1
Uncharacterized ATP-dependent helicase SSO0112 1
Uncharacterized ATP-dependent helicase YprA 1