Orthogroup:group_4641



Homologs in group_4641

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1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
PMI_RS14230 PMI_RS14230 Proteus mirabilis HI4320 - type II toxin-antitoxin system VapC family toxin

Distribution of group_4641 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of the RefSeq best hits of group_4641

Orthogroup content: 1 members

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This page summarizes the annotation of all members of the orthologous group group_4641.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 1

Product

# Product Occurence
1 type II toxin-antitoxin system VapC family toxin 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1487 1 V Defense mechanisms (V) Ribonuclease/mRNA interferase VapC, contains PIN domain

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K18828 1 tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01850 1 PIN domain

Annotations of the 8 SwissProt hits

Annotation Number of occurrences
Ribonuclease VapC 1
Ribonuclease VapC1 3
Ribonuclease VapC2 2
tRNA(fMet)-specific endonuclease VapC 2