Orthogroup:group_4178


Homologs in group_4178

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1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
F4V73_RS16730 F4V73_RS16730 Morganella psychrotolerans tssE type VI secretion system baseplate subunit TssE

Distribution of group_4178 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of the RefSeq best hits of group_4178

Orthogroup content: 1 members

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This page summarizes the annotation of all members of the orthologous group group_4178.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 tssE 1

Product

# Product Occurence
1 type VI secretion system baseplate subunit TssE 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3518 1 U Intracellular trafficking, secretion, and vesicular transport (U) Predicted component of the type VI protein secretion system

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K11905 1 type VI secretion system protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF04965 1 Baseplate wedge protein gp25

Virulence factor Annotation(s)

VF gene ID Occurences Protein VF ID Category
VFG049292 1 type VI secretion system baseplate subunit TssE VF0784 Effector delivery system