Orthogroup:group_403



Homologs in group_403

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8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_16285 FBDBKF_16285 Morganella morganii S1 rfaQ putative lipopolysaccharide heptosyltransferase III
EHELCC_16320 EHELCC_16320 Morganella morganii S2 rfaQ putative lipopolysaccharide heptosyltransferase III
NLDBIP_17020 NLDBIP_17020 Morganella morganii S4 rfaQ putative lipopolysaccharide heptosyltransferase III
LHKJJB_16940 LHKJJB_16940 Morganella morganii S3 rfaQ putative lipopolysaccharide heptosyltransferase III
HKOGLL_16900 HKOGLL_16900 Morganella morganii S5 rfaQ putative lipopolysaccharide heptosyltransferase III
F4V73_RS17305 F4V73_RS17305 Morganella psychrotolerans rfaQ putative lipopolysaccharide heptosyltransferase III
PMI_RS15625 PMI_RS15625 Proteus mirabilis HI4320 - glycosyltransferase family 9 protein
PMI_RS15665 PMI_RS15665 Proteus mirabilis HI4320 rfaQ putative lipopolysaccharide heptosyltransferase III

Distribution of group_403 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_403 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_403

Orthogroup content: 8 members

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This page summarizes the annotation of all members of the orthologous group group_403.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rfaQ 7
2 - 1

Product

# Product Occurence
1 putative lipopolysaccharide heptosyltransferase III 7
2 glycosyltransferase family 9 protein 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0859 8 M Cell wall/membrane/envelope biogenesis (M) ADP-heptose:LPS heptosyltransferase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02849 7 lipopolysaccharide heptosyltransferase III [EC:2.4.99.25] Lipopolysaccharide biosynthesis
Metabolic pathways
-

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01075 8 Glycosyltransferase family 9 (heptosyltransferase)

Annotations of the 15 SwissProt hits

Annotation Number of occurrences
Lipooligosaccharide heptosyltransferase 2 4
Lipopolysaccharide core heptosyltransferase OpsX 1
Lipopolysaccharide heptosyltransferase 1 5
Lipopolysaccharide heptosyltransferase 2 2
Lipopolysaccharide heptosyltransferase 3 2
Putative glycosyltransferase HI_0523 1

Protein length

Min length 333
Max length 357
Mean length (sd) 353.6 (8.4)
Median length 357.0

Protein length distribution