Orthogroup:group_402



Homologs in group_402

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8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_16240 FBDBKF_16240 Morganella morganii S1 radC DNA repair protein RadC
EHELCC_16275 EHELCC_16275 Morganella morganii S2 radC DNA repair protein RadC
NLDBIP_17065 NLDBIP_17065 Morganella morganii S4 radC DNA repair protein RadC
LHKJJB_16985 LHKJJB_16985 Morganella morganii S3 radC DNA repair protein RadC
HKOGLL_16855 HKOGLL_16855 Morganella morganii S5 radC DNA repair protein RadC
F4V73_RS17360 F4V73_RS17360 Morganella psychrotolerans radC DNA repair protein RadC
PMI_RS12065 PMI_RS12065 Proteus mirabilis HI4320 radC DNA repair protein RadC
PMI_RS15605 PMI_RS15605 Proteus mirabilis HI4320 radC DNA repair protein RadC

Distribution of group_402 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_402 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_402

Orthogroup content: 8 members

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This page summarizes the annotation of all members of the orthologous group group_402.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 radC 8

Product

# Product Occurence
1 DNA repair protein RadC 8

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2003 8 L Replication, recombination and repair (L) DNA repair protein RadC, contains a helix-hairpin-helix DNA-binding motif

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03630 8 DNA repair protein RadC - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF04002 8 RadC-like JAB domain
PF20582 7 UPF0758 N-terminal

Annotations of the 400 SwissProt hits

Annotation Number of occurrences
UPF0758 protein 1
UPF0758 protein A1S_2918 1
UPF0758 protein AB57_3420 1
UPF0758 protein ABBFA_000545 1
UPF0758 protein ABC2615 1
UPF0758 protein ABO_0214 1
UPF0758 protein ACIAD3126 1
UPF0758 protein AFE_0358 1
UPF0758 protein AHA_0160 1
UPF0758 protein AM1_4368 1
UPF0758 protein APJL_2017 1
UPF0758 protein APL_1970 1
UPF0758 protein APP7_2058 1
UPF0758 protein ASA_4229 1
UPF0758 protein AZOSEA04420 1
UPF0758 protein Aave_3773 1
UPF0758 protein Ajs_3450 1
UPF0758 protein Amet_2289 1
UPF0758 protein Asuc_0013 1
UPF0758 protein Atu1607 1
UPF0758 protein Ava_0172 1
UPF0758 protein Avin_02940 1
UPF0758 protein BAA_4704 1
UPF0758 protein BAB1_1301 1
UPF0758 protein BAMEG_4721 1
UPF0758 protein BAV2405 1
UPF0758 protein BA_4685/GBAA_4685/BAS4351 1
UPF0758 protein BAbS19_I12140 1
UPF0758 protein BB3258 1
UPF0758 protein BCAH187_A4587 1
UPF0758 protein BCAN_A1306 1
UPF0758 protein BCA_4566 1
UPF0758 protein BCB4264_A4572 1
UPF0758 protein BCE33L4198 1
UPF0758 protein BCE_4545 1
UPF0758 protein BCG9842_B0662 1
UPF0758 protein BCQ_4241 1
UPF0758 protein BH3032 1
UPF0758 protein BLi02933/BL00636 1
UPF0758 protein BMA10229_A1020 1
UPF0758 protein BMA10247_2099 1
UPF0758 protein BMA2230 1
UPF0758 protein BMASAVP1_A2646 1
UPF0758 protein BMEA_A1330 1
UPF0758 protein BMEI0718 1
UPF0758 protein BP1235 1
UPF0758 protein BPP1850 1
UPF0758 protein BPUM_2444 1
UPF0758 protein BR1283/BS1330_I1279 1
UPF0758 protein BT9727_4187 1
UPF0758 protein BTH_I0781 1
UPF0758 protein BURPS1106A_0984 1
UPF0758 protein BURPS1710b_1139 1
UPF0758 protein BURPS668_0979 1
UPF0758 protein BamMC406_2419 1
UPF0758 protein Bamb_2548 1
UPF0758 protein Bcen2424_2501 1
UPF0758 protein Bcen_1890 1
UPF0758 protein Bcenmc03_2526 1
UPF0758 protein Bcep1808_2579 1
UPF0758 protein Bcep18194_A5833 1
UPF0758 protein BcerKBAB4_4299 1
UPF0758 protein Bpet3149 1
UPF0758 protein Bphyt_3148 1
UPF0758 protein Bpro_0948 1
UPF0758 protein BruAb1_1284 1
UPF0758 protein Bxeno_A3578 1
UPF0758 protein CA_C1241 1
UPF0758 protein CBO3003/CLC_2900 1
UPF0758 protein CBUD_1789 1
UPF0758 protein CD630_11440 1
UPF0758 protein CGSHiEE_07200 1
UPF0758 protein CHY_0341 1
UPF0758 protein CJA_3522 1
UPF0758 protein CKL_0865 1
UPF0758 protein CKO_05095 1
UPF0758 protein CKR_0778 1
UPF0758 protein CLB_3028 1
UPF0758 protein CLD_1541 1
UPF0758 protein CLH_0547 1
UPF0758 protein CLI_3057 1
UPF0758 protein CLJ_B3261 1
UPF0758 protein CLK_2387 1
UPF0758 protein CLL_A0562 1
UPF0758 protein CLM_3399 1
UPF0758 protein COPRO5265_1522 1
UPF0758 protein CPE2144 1
UPF0758 protein CPF_2399 1
UPF0758 protein CPR_2111 1
UPF0758 protein CT0611 1
UPF0758 protein CTC_02075 1
UPF0758 protein CV_3079 1
UPF0758 protein Cag_1513 1
UPF0758 protein Cagg_0777 1
UPF0758 protein Caur_3603 1
UPF0758 protein Cbei_0490 1
UPF0758 protein CbuK_0488 1
UPF0758 protein Chy400_3887 1
UPF0758 protein Clos_1766 1
UPF0758 protein Cpar_0627 1
UPF0758 protein Cpha266_1761 1
UPF0758 protein Cphamn1_0831 1
UPF0758 protein Csal_2972 1
UPF0758 protein Cvib_1178 1
UPF0758 protein Cyan7425_1778 1
UPF0758 protein DSY3180 1
UPF0758 protein Daci_1904 1
UPF0758 protein Daro_3142 1
UPF0758 protein Daud_1467 1
UPF0758 protein Dhaf_4352 1
UPF0758 protein Dred_2549 1
UPF0758 protein Dtpsy_2777 1
UPF0758 protein ECA0145 1
UPF0758 protein EF_2926 1
UPF0758 protein ESA_04094 1
UPF0758 protein Ent638_0101 1
UPF0758 protein FMG_0357 1
UPF0758 protein FN0909 1
UPF0758 protein Fjoh_0413 1
UPF0758 protein GK2618 1
UPF0758 protein GSU0386 1
UPF0758 protein GTNG_2548 1
UPF0758 protein GWCH70_2550 1
UPF0758 protein Glov_0523 1
UPF0758 protein Gura_4138 1
UPF0758 protein H16_A3033 1
UPF0758 protein HCH_01020 1
UPF0758 protein HD_0732 1
UPF0758 protein HEAR2468 1
UPF0758 protein HI_0952 1
UPF0758 protein HSM_0009 1
UPF0758 protein HS_0144 1
UPF0758 protein Hhal_2301 1
UPF0758 protein IL0240 1
UPF0758 protein KPK_0116 1
UPF0758 protein KPN78578_39390 1
UPF0758 protein LCA_0852 1
UPF0758 protein LHK_01907 1
UPF0758 protein LL1007 1
UPF0758 protein LMHCC_1020 1
UPF0758 protein LMOf2365_1569 1
UPF0758 protein LPC_1989 1
UPF0758 protein Lcho_0695 1
UPF0758 protein Lferr_0528 1
UPF0758 protein Lm4b_01560 1
UPF0758 protein M28_Spy0816 1
UPF0758 protein M6_Spy0838 1
UPF0758 protein MADE_1000235 1
UPF0758 protein MAE_44350 1
UPF0758 protein MA_1979 1
UPF0758 protein MGAS10270_Spy0956 1
UPF0758 protein MGAS10750_Spy0991 1
UPF0758 protein MGAS2096_Spy0915 1
UPF0758 protein MGAS9429_Spy0959 1
UPF0758 protein MM_2791 1
UPF0758 protein MW1604 1
UPF0758 protein Maqu_3564 1
UPF0758 protein Mbar_A2303 1
UPF0758 protein Mbur_0382 1
UPF0758 protein Mfla_0315 1
UPF0758 protein Mhun_2739 1
UPF0758 protein Mlg_2664 1
UPF0758 protein Mmwyl1_0624 1
UPF0758 protein Moth_0536 1
UPF0758 protein Mpe_A2695 1
UPF0758 protein NE1464 1
UPF0758 protein NGK_1225 1
UPF0758 protein NGO0681 1
UPF0758 protein NGR_c13970 1
UPF0758 protein NMA1448 1
UPF0758 protein NMB1038 1
UPF0758 protein NMC1174 1
UPF0758 protein NMCC_1157 1
UPF0758 protein NT01CX_1687 1
UPF0758 protein NTHI1125 1
UPF0758 protein NWMN_1555 1
UPF0758 protein Neut_0782 1
UPF0758 protein Nmul_A2138 1
UPF0758 protein Noc_0236 1
UPF0758 protein Npun_R6401 1
UPF0758 protein Oant_1909 1
UPF0758 protein PA14_70230 1
UPF0758 protein PA5319 1
UPF0758 protein PBPRA0202 1
UPF0758 protein PC1_4100 1
UPF0758 protein PCC7424_2073 1
UPF0758 protein PD_0117 1
UPF0758 protein PFLU_5982 1
UPF0758 protein PFL_6051 1
UPF0758 protein PG_0894 1
UPF0758 protein PLES_57141 1
UPF0758 protein PM1152 1
UPF0758 protein PP_5284 1
UPF0758 protein PSEEN5431 1
UPF0758 protein PSHAa2643 1
UPF0758 protein PSPA7_6095 1
UPF0758 protein PSPPH_0210 1
UPF0758 protein PSPTO_0086 1
UPF0758 protein PST_0473 1
UPF0758 protein PXO_02919 1
UPF0758 protein Paes_0735 1
UPF0758 protein Patl_0046 1
UPF0758 protein Pcar_0065 1
UPF0758 protein Pcryo_2119 1
UPF0758 protein Pden_2304 1
UPF0758 protein Pfl01_5539 1
UPF0758 protein Ping_0056 1
UPF0758 protein Plut_0598 1
UPF0758 protein Pmen_4376 1
UPF0758 protein Pnap_3339 1
UPF0758 protein Ppha_0935 1
UPF0758 protein Ppro_3582 1
UPF0758 protein PputGB1_5335 1
UPF0758 protein PputW619_0186 1
UPF0758 protein Pput_5194 1
UPF0758 protein PsycPRwf_0491 1
UPF0758 protein Psyc_1834 1
UPF0758 protein Psyr_0222 1
UPF0758 protein R01728 1
UPF0758 protein RALTA_A2508 1
UPF0758 protein RBAM_025090 1
UPF0758 protein RHECIAT_CH0001935 1
UPF0758 protein RHE_CH01848 1
UPF0758 protein RL2068 1
UPF0758 protein RPB_0700 1
UPF0758 protein RSc2444 1
UPF0758 protein Rcas_0037 1
UPF0758 protein Reut_A2732 1
UPF0758 protein Rfer_3252 1
UPF0758 protein Rleg2_1511 1
UPF0758 protein RoseRS_0767 1
UPF0758 protein Rpic_2712 1
UPF0758 protein Rxyl_1530 1
UPF0758 protein SAB1521c 1
UPF0758 protein SACOL1707 1
UPF0758 protein SAG1101 1
UPF0758 protein SAK_1186 1
UPF0758 protein SAOUHSC_01763 1
UPF0758 protein SAS1589 1
UPF0758 protein SAUSA300_1608 1
UPF0758 protein SEQ_1136 1
UPF0758 protein SE_1336 1
UPF0758 protein SGO_1229 1
UPF0758 protein SH1266 1
UPF0758 protein SO_4248 1
UPF0758 protein SP70585_1163 1
UPF0758 protein SPD_0975 1
UPF0758 protein SPG_1010 1
UPF0758 protein SPH_1181 1
UPF0758 protein SPJ_1027 1
UPF0758 protein SPN23F10090 1
UPF0758 protein SPO0054 1
UPF0758 protein SPP_1095 1
UPF0758 protein SPT_1135 1
UPF0758 protein SP_1088 1
UPF0758 protein SPs0978 1
UPF0758 protein SPy_1118/M5005_Spy0840 1
UPF0758 protein SRU_2338 1
UPF0758 protein SSA_1218 1
UPF0758 protein SSP1105 1
UPF0758 protein SSU98_1084 1
UPF0758 protein STER_1430 1
UPF0758 protein STH371 1
UPF0758 protein SUB0843 1
UPF0758 protein SYNPCC7002_A0220 1
UPF0758 protein SZO_09140 1
UPF0758 protein Sama_0327 1
UPF0758 protein Sbal195_0388 1
UPF0758 protein Sbal223_0402 1
UPF0758 protein Sbal_0377 1
UPF0758 protein Sca_1264 1
UPF0758 protein Sde_3678 1
UPF0758 protein Sden_0326 1
UPF0758 protein Sez_1052 1
UPF0758 protein Sfri_3828 1
UPF0758 protein Shal_0429 1
UPF0758 protein Shew185_0376 1
UPF0758 protein Shew_3481 1
UPF0758 protein Shewana3_3770 1
UPF0758 protein Shewmr4_3597 1
UPF0758 protein Shewmr7_0359 1
UPF0758 protein Smal_0281 1
UPF0758 protein Smed_1459 1
UPF0758 protein Smlt0399 1
UPF0758 protein Spea_3837 1
UPF0758 protein Spro_4842 1
UPF0758 protein Sputcn32_0462 1
UPF0758 protein Sputw3181_0338 1
UPF0758 protein Spy49_0870 1
UPF0758 protein SpyM3_0777 1
UPF0758 protein SpyM50948 1
UPF0758 protein Ssed_0385 1
UPF0758 protein Swol_1642 1
UPF0758 protein Swoo_4561 1
UPF0758 protein TERTU_0184 1
UPF0758 protein TM_1557 1
UPF0758 protein TTE0897 1
UPF0758 protein Tbd_2588 1
UPF0758 protein Tcr_1917 1
UPF0758 protein Tery_2667 1
UPF0758 protein Tgr7_0100 1
UPF0758 protein Tola_0183 1
UPF0758 protein Tpet_1235 1
UPF0758 protein VC0395_A2597/VC395_0249 1
UPF0758 protein VCM66_0205 1
UPF0758 protein VC_0217 1
UPF0758 protein VC_0510 1
UPF0758 protein VC_1786 1
UPF0758 protein VFMJ11_0123 1
UPF0758 protein VF_0126 1
UPF0758 protein VIBHAR_00653 1
UPF0758 protein VP0184 1
UPF0758 protein VSAL_I0192 1
UPF0758 protein VS_0182 1
UPF0758 protein VV0285 1
UPF0758 protein VV1_0825 1
UPF0758 protein Vapar_4033 1
UPF0758 protein Veis_1654 1
UPF0758 protein XAC3915 1
UPF0758 protein XCC3860 1
UPF0758 protein XCV4028 1
UPF0758 protein XC_3944 1
UPF0758 protein XF_0148 1
UPF0758 protein XOO0462 1
UPF0758 protein XOO0495 1
UPF0758 protein YE0063 1
UPF0758 protein YPA_3493 1
UPF0758 protein YPDSF_3856 1
UPF0758 protein YPK_4155 1
UPF0758 protein YPN_3801 1
UPF0758 protein YPO0049/y0092/YP_0050 1
UPF0758 protein YPTB0046 1
UPF0758 protein YPTS_0048 1
UPF0758 protein YeeS 1
UPF0758 protein YfjY 1
UPF0758 protein YicR 39
UPF0758 protein YkfG 1
UPF0758 protein YpAngola_A0055 1
UPF0758 protein YpsIP31758_0061 1
UPF0758 protein YsxA 1
UPF0758 protein alr2351 1
UPF0758 protein aq_1610 1
UPF0758 protein azo1137 1
UPF0758 protein cce_2495 1
UPF0758 protein gbs1168 1
UPF0758 protein lin1584 1
UPF0758 protein llmg_1515 1
UPF0758 protein lmo1549 1
UPF0758 protein lpg2489 1
UPF0758 protein lpl2409 1
UPF0758 protein lpp2553 1
UPF0758 protein lwe1562 1
UPF0758 protein mma_2551 1
UPF0758 protein pc1765 1
UPF0758 protein plu4865 1
UPF0758 protein sll0766 1
UPF0758 protein spr0996 1
UPF0758 protein spyM18_1079 1
UPF0758 protein str1465 1
UPF0758 protein stu1465 1
UPF0758 protein swp_2203 1
UPF0758 protein tlr1707 1

Protein length

Min length 165
Max length 224
Mean length (sd) 216.5 (20.8)
Median length 224.0

Protein length distribution