Orthogroup:group_3914


Homologs in group_3914

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2 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
PMI_RS12005 PMI_RS12005 Proteus mirabilis HI4320 - lytic transglycosylase domain-containing protein
PMI_RS18545 PMI_RS18545 Proteus mirabilis HI4320 - lytic transglycosylase domain-containing protein

Distribution of group_3914 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of the RefSeq best hits of group_3914

Orthogroup content: 2 members

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This page summarizes the annotation of all members of the orthologous group group_3914.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 2

Product

# Product Occurence
1 lytic transglycosylase domain-containing protein 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0741 1 M Cell wall/membrane/envelope biogenesis (M) Soluble lytic murein transglycosylase or regulatory protein s ( may contain LysM/invasin domain)

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03194 1 type IV secretion system protein VirB1 Bacterial secretion system -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01464 2 Transglycosylase SLT domain

Annotations of the 7 SwissProt hits

Annotation Number of occurrences
Protein virB1 3
Type IV secretion system protein virB1 4

Protein length

Min length 182
Max length 211
Mean length (sd) 196.5 (20.5)
Median length 196.5

Protein length distribution