Orthogroup:group_3907



Homologs in group_3907

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2 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
PMI_RS13355 PMI_RS13355 Proteus mirabilis HI4320 - multidrug efflux SMR transporter
PMI_RS13360 PMI_RS13360 Proteus mirabilis HI4320 - multidrug efflux SMR transporter

Distribution of group_3907 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of the RefSeq best hits of group_3907

Orthogroup content: 2 members

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This page summarizes the annotation of all members of the orthologous group group_3907.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 2

Product

# Product Occurence
1 multidrug efflux SMR transporter 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2076 2 V Defense mechanisms (V) Multidrug transporter EmrE and related cation transporters

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03297 2 small multidrug resistance pump - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00893 2 Small Multidrug Resistance protein

Annotations of the 160 SwissProt hits

Annotation Number of occurrences
Guanidinium exporter 16
Multidrug resistance protein EbrA 3
Multidrug resistance protein EbrB 3
Multidrug resistance protein Mmr 2
Multidrug resistance protein mmr 3
Multidrug transporter EmrE 1
Multidrug transporter PA4990 1
Nicotine metabolites export pump subunit NepA 1
Nicotine metabolites export pump subunit NepB 1
Probable guanidinium efflux system subunit GdnD 2
Putative ethidium bromide resistance protein 3
Quaternary ammonium compound-resistance protein QacC 2
Quaternary ammonium compound-resistance protein QacE 2
Quaternary ammonium compound-resistance protein QacF 1
Quaternary ammonium compound-resistance protein QacG 1
Quaternary ammonium compound-resistance protein QacH 1
Spermidine export protein MdtI 58
Spermidine export protein MdtJ 57
Uncharacterized membrane protein YvaE 1
Uncharacterized membrane protein YvdR 1

Protein length

Min length 108
Max length 135
Mean length (sd) 121.5 (19.1)
Median length 121.5

Protein length distribution