Orthogroup:group_3894


Homologs in group_3894

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2 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
PMI_RS09540 PMI_RS09540 Proteus mirabilis HI4320 - (Fe-S)-binding protein
PMI_RS15065 PMI_RS15065 Proteus mirabilis HI4320 - (Fe-S)-binding protein

Distribution of group_3894 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of the RefSeq best hits of group_3894

Orthogroup content: 2 members

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This page summarizes the annotation of all members of the orthologous group group_3894.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 2

Product

# Product Occurence
1 (Fe-S)-binding protein 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0247 2 C Energy production and conversion (C) Fe-S cluster-containing oxidoreductase, includes glycolate oxidase subunit GlcF

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K18928 2 L-lactate dehydrogenase complex protein LldE - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF02754 2 Cysteine-rich domain

Annotations of the 52 SwissProt hits

Annotation Number of occurrences
Anaerobic glycerol-3-phosphate dehydrogenase subunit C 3
CoB--CoM heterodisulfide reductase subunit B 1 1
Dihydromethanophenazine:CoB--CoM heterodisulfide reductase subunit D 4
Fumarate reductase (CoM/CoB) subunit B 1
Glycolate oxidase iron-sulfur subunit 1
Lactate utilization protein A 22
Lactate utilization protein A 1 8
Lactate utilization protein A 2 8
Probable glycolate oxidase iron-sulfur subunit 1
Uncharacterized iron-sulfur protein MJ0092 1
Uncharacterized iron-sulfur protein MMP1067 1
Uncharacterized protein YkgE 1

Protein length

Min length 239
Max length 245
Mean length (sd) 242.0 (4.2)
Median length 242.0

Protein length distribution