Orthogroup:group_3890


Homologs in group_3890

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2 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
PMI_RS05935 PMI_RS05935 Proteus mirabilis HI4320 - tripartite tricarboxylate transporter permease
PMI_RS14510 PMI_RS14510 Proteus mirabilis HI4320 - tripartite tricarboxylate transporter permease

Distribution of group_3890 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of the RefSeq best hits of group_3890

Orthogroup content: 2 members

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This page summarizes the annotation of all members of the orthologous group group_3890.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 2

Product

# Product Occurence
1 tripartite tricarboxylate transporter permease 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3333 2 R General function prediction only (R) TctA family transporter

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K07793 2 putative tricarboxylic transport membrane protein Two-component system -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01970 2 Tripartite tricarboxylate transporter TctA family

Annotations of the 2 SwissProt hits

Annotation Number of occurrences
Uncharacterized 52.8 kDa protein in TAR-I ttuC' 3'region 1
Uncharacterized protein in TAR-II ttuC' 3'region (Fragment) 1

Protein length

Min length 495
Max length 504
Mean length (sd) 499.5 (6.4)
Median length 499.5

Protein length distribution