Orthogroup:group_3872



Homologs in group_3872

Help

2 homologs were identified in 2 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
F4V73_RS19205 F4V73_RS19205 Morganella psychrotolerans - type II toxin-antitoxin system YafQ family toxin
PMI_RS16445 PMI_RS16445 Proteus mirabilis HI4320 - type II toxin-antitoxin system YafQ family toxin

Distribution of group_3872 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of the RefSeq best hits of group_3872

Orthogroup content: 2 members

Help

This page summarizes the annotation of all members of the orthologous group group_3872.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 2

Product

# Product Occurence
1 type II toxin-antitoxin system YafQ family toxin 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3041 2 JV Translation, ribosomal structure and biogenesis (J)
Defense mechanisms (V)
mRNA-degrading endonuclease YafQ (mRNA interferase), toxin component of the YafQ-DinJ toxin-antitoxin module

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K19157 2 mRNA interferase YafQ [EC:3.1.-.-] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF15738 2 Bacterial toxin of type II toxin-antitoxin system, YafQ

Annotations of the 3 SwissProt hits

Annotation Number of occurrences
Putative toxin YafQ 1
mRNA interferase toxin YafQ 2

Protein length

Min length 86
Max length 91
Mean length (sd) 88.5 (3.5)
Median length 88.5

Protein length distribution