Orthogroup:group_3802



Homologs in group_3802

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2 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
F4V73_RS00345 F4V73_RS00345 Morganella psychrotolerans - type II toxin-antitoxin system HigB family toxin
F4V73_RS18330 F4V73_RS18330 Morganella psychrotolerans - type II toxin-antitoxin system HigB family toxin

Distribution of group_3802 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of the RefSeq best hits of group_3802

Orthogroup content: 2 members

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This page summarizes the annotation of all members of the orthologous group group_3802.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 2

Product

# Product Occurence
1 type II toxin-antitoxin system HigB family toxin 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG4680 2 JV Translation, ribosomal structure and biogenesis (J)
Defense mechanisms (V)
mRNA-degrading endonuclease (mRNA interferase) HigB, toxic component of the HigAB toxin-antitoxin module

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K19166 2 mRNA interferase HigB [EC:3.1.-.-] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF09907 2 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system

Annotations of the 4 SwissProt hits

Annotation Number of occurrences
mRNA interferase HigB 3
mRNA interferase toxin HigB 1

Protein length

Min length 94
Max length 103
Mean length (sd) 98.5 (6.4)
Median length 98.5

Protein length distribution