Orthogroup:group_3778


Homologs in group_3778

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2 homologs were identified in 2 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_20230 FBDBKF_20230 Morganella morganii S1 blaTEM-1 broad-spectrum class A beta-lactamase TEM-1
EHELCC_19595 EHELCC_19595 Morganella morganii S2 blaTEM-1 broad-spectrum class A beta-lactamase TEM-1

Distribution of group_3778 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of the RefSeq best hits of group_3778

Orthogroup content: 2 members

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This page summarizes the annotation of all members of the orthologous group group_3778.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 blaTEM-1 2

Product

# Product Occurence
1 broad-spectrum class A beta-lactamase TEM-1 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2367 2 V Defense mechanisms (V) Beta-lactamase class A

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K18698 2 beta-lactamase class A TEM [EC:3.5.2.6] beta-Lactam resistance -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF13354 2 Beta-lactamase enzyme family

AMR gene Annotation(s)

Gene Occurences Description Scope Type Class Subclass HMM
blaTEM-1 2 broad-spectrum class A beta-lactamase TEM-1 core AMR BETA-LACTAM BETA-LACTAM NF000531 

Annotations of the 89 SwissProt hits

Annotation Number of occurrences
Beta-lactamase 27
Beta-lactamase 1 4
Beta-lactamase 2 1
Beta-lactamase 3 1
Beta-lactamase AER-1 1
Beta-lactamase AST-1 1
Beta-lactamase BRO-1 1
Beta-lactamase CARB-3 1
Beta-lactamase CARB-4 1
Beta-lactamase CARB-6 1
Beta-lactamase CTX-M-1 1
Beta-lactamase CTX-M-14 1
Beta-lactamase CTX-M-15 1
Beta-lactamase CTX-M-2 1
Beta-lactamase CTX-M-25 1
Beta-lactamase CTX-M-4 1
Beta-lactamase CTX-M-5 1
Beta-lactamase CTX-M-6 1
Beta-lactamase CTX-M-8 1
Beta-lactamase CTX-M-97 1
Beta-lactamase FAR-1 1
Beta-lactamase GES-1 1
Beta-lactamase GES-2 1
Beta-lactamase GES-5 1
Beta-lactamase L2 1
Beta-lactamase OXY-1 1
Beta-lactamase OXY-2 1
Beta-lactamase Ohio-1 1
Beta-lactamase PSE-1 1
Beta-lactamase PSE-4 1
Beta-lactamase ROB-1 3
Beta-lactamase SHV-1 2
Beta-lactamase SHV-13 1
Beta-lactamase SHV-2 4
Beta-lactamase SHV-24 1
Beta-lactamase SHV-29 1
Beta-lactamase SHV-3 1
Beta-lactamase SHV-34 1
Beta-lactamase SHV-4 1
Beta-lactamase SHV-46 1
Beta-lactamase SHV-5 2
Beta-lactamase SHV-6 (Fragment) 1
Beta-lactamase SHV-8 1
Beta-lactamase TEM 2
Beta-lactamase TEM-12 1
Beta-lactamase Toho-1 1
Beta-lactamase Toho-2 1
Carbapenem-hydrolyzing beta-lactamase KPC 2
Carbapenem-hydrolyzing beta-lactamase Sme-1 1
Extended-spectrum beta-lactamase PER-1 1
Imipenem-hydrolyzing beta-lactamase 1

Protein length

Unique protein length 286

Protein length distribution