Orthogroup:group_3754


Homologs in group_3754

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2 homologs were identified in 2 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_12615 FBDBKF_12615 Morganella morganii S1 cas6f type I-F CRISPR-associated endoribonuclease Cas6/Csy4
F4V73_RS07850 F4V73_RS07850 Morganella psychrotolerans cas6f type I-F CRISPR-associated endoribonuclease Cas6/Csy4

Distribution of group_3754 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of the RefSeq best hits of group_3754

Orthogroup content: 2 members

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This page summarizes the annotation of all members of the orthologous group group_3754.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 cas6f 2

Product

# Product Occurence
1 type I-F CRISPR-associated endoribonuclease Cas6/Csy4 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG5935 2 V Defense mechanisms (V) CRISPR-Cas system endoribonuclease Cas6f/Csy4, RAMP superfamily

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K19130 2 CRISPR-associated endonuclease Csy4 [EC:3.1.-.-] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF09618 2 CRISPR-associated protein (Cas_Csy4)

Annotations of the 2 SwissProt hits

Annotation Number of occurrences
CRISPR-associated endonuclease Cas6/Csy4 2

Protein length

Min length 185
Max length 208
Mean length (sd) 196.5 (16.3)
Median length 196.5

Protein length distribution