Orthogroup:group_3721


Homologs in group_3721

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3 homologs were identified in 2 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
F4V73_RS00350 F4V73_RS00350 Morganella psychrotolerans - helix-turn-helix domain-containing protein
F4V73_RS18325 F4V73_RS18325 Morganella psychrotolerans - helix-turn-helix domain-containing protein
PMI_RS17395 PMI_RS17395 Proteus mirabilis HI4320 - ImmA/IrrE family metallo-endopeptidase

Distribution of group_3721 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_3721 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_3721

Orthogroup content: 3 members

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This page summarizes the annotation of all members of the orthologous group group_3721.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 3

Product

# Product Occurence
1 helix-turn-helix domain-containing protein 2
2 ImmA/IrrE family metallo-endopeptidase 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG5499 3 V Defense mechanisms (V) Antitoxin component HigA of the HigAB toxin-antitoxin module, contains an N-terminal HTH domain

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K18831 3 HTH-type transcriptional regulator / antitoxin HigA - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01381 1 Helix-turn-helix
PF06114 1 IrrE N-terminal-like domain

Annotations of the 3 SwissProt hits

Annotation Number of occurrences
Antitoxin HigA 3

Protein length

Min length 138
Max length 402
Mean length (sd) 227.0 (151.6)
Median length 141.0

Protein length distribution