Orthogroup:group_3713



Homologs in group_3713

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3 homologs were identified in 3 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
EHELCC_19175 EHELCC_19175 Morganella morganii S2 - Helix-turn-helix transcriptional regulator
NLDBIP_19145 NLDBIP_19145 Morganella morganii S4 - Helix-turn-helix transcriptional regulator
LHKJJB_19035 LHKJJB_19035 Morganella morganii S3 - Helix-turn-helix transcriptional regulator

Distribution of group_3713 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_3713 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_3713

Orthogroup content: 3 members

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This page summarizes the annotation of all members of the orthologous group group_3713.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 3

Product

# Product Occurence
1 Helix-turn-helix transcriptional regulator 3

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2932 3 X Mobilome: prophages, transposons (X) Phage repressor protein C, contains Cro/C1-type HTH and peptisase s24 domains

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00717 3 Peptidase S24-like
PF01381 3 Helix-turn-helix

Annotations of the 13 SwissProt hits

Annotation Number of occurrences
26 kDa repressor protein 1
Competence pilus inhibition repressor 1
HTH-type transcriptional regulator PrtR 1
HTH-type transcriptional regulator RdgA 1
HTH-type transcriptional regulator for conjugative element R391 1
HTH-type transcriptional regulator for conjugative element SXT 1
HTH-type transcriptional regulator for conjugative element pMERPH 1
Regulatory protein cro 1
Repressor protein CI 2
Repressor protein CI (Fragment) 1
SPbeta prophage-derived uncharacterized HTH-type transcriptional regulator YonR 1
Uncharacterized HTH-type transcriptional regulator HI_1476 1

Protein length

Unique protein length 227

Protein length distribution