Orthogroup:group_3699


Homologs in group_3699

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3 homologs were identified in 2 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_12410 FBDBKF_12410 Morganella morganii S1 - Helix-turn-helix domain-containing protein
PMI_RS04440 PMI_RS04440 Proteus mirabilis HI4320 - helix-turn-helix domain-containing protein
PMI_RS11990 PMI_RS11990 Proteus mirabilis HI4320 - helix-turn-helix domain-containing protein

Distribution of group_3699 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_3699 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_3699

Orthogroup content: 3 members

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This page summarizes the annotation of all members of the orthologous group group_3699.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 3

Product

# Product Occurence
1 Helix-turn-helix domain-containing protein 1
2 helix-turn-helix domain-containing protein 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG4197 3 K Transcription (K) DNA-binding transcriptional regulator YdaS, prophage-encoded, Cro superfamily

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K22302 1 transcriptional repressor of cell division inhibition gene dicB - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF15943 3 Bacterial toxin YdaS

Annotations of the 3 SwissProt hits

Annotation Number of occurrences
Prophage transcriptional regulatory protein 1
Regulatory protein cro 1
Uncharacterized protein YdaS 1

Protein length

Min length 76
Max length 83
Mean length (sd) 79.3 (3.5)
Median length 79.0

Protein length distribution