Orthogroup:group_3698


Homologs in group_3698

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4 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
PMI_RS05775 PMI_RS05775 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS10890 PMI_RS10890 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS10895 PMI_RS10895 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS17140 PMI_RS17140 Proteus mirabilis HI4320 - fimbrial protein

Distribution of group_3698 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_3698 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_3698

Orthogroup content: 4 members

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This page summarizes the annotation of all members of the orthologous group group_3698.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 4

Product

# Product Occurence
1 fimbrial protein 4

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3539 4 N Cell motility (N) Pilin (type 1 fimbrial protein)

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K07349 3 minor fimbrial subunit - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00419 3 Fimbrial protein

Annotations of the 23 SwissProt hits

Annotation Number of occurrences
Fimbrial-like protein FimF 1
Fimbrin-like protein FimI 1
Long polar fimbria protein A 1
Major MR/P fimbria protein 1
PAP fimbrial minor pilin protein 1
PRS fimbrial minor pilin protein 1
Pap fimbrial major pilin protein 1
Probable fimbrial subunit LpfE 1
Probable major fimbrial subunit LpfA 1
Protein FimF 1
Protein FimG 1
Protein LpfE 1
Putative minor fimbrial subunit PmfF 1
S-fimbrial adhesin protein SfaS 1
S-fimbrial protein subunit SfaG 1
Type-1 fimbrial protein subunit 1
Type-1 fimbrial protein, A chain 1
Type-1 fimbrial protein, C chain 2
Uncharacterized fimbrial-like protein YcbU 1
Uncharacterized fimbrial-like protein YcbV 1
Uncharacterized fimbrial-like protein YdeR 1
Uncharacterized fimbrial-like protein YdeS 1

Protein length

Min length 165
Max length 188
Mean length (sd) 174.0 (9.9)
Median length 171.5

Protein length distribution