Orthogroup:group_3675


Homologs in group_3675

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
EHELCC_06465 EHELCC_06465 Morganella morganii S2 - MFS transporter
NLDBIP_06785 NLDBIP_06785 Morganella morganii S4 - MFS transporter
HKOGLL_04605 HKOGLL_04605 Morganella morganii S5 - MFS transporter
PMI_RS12825 PMI_RS12825 Proteus mirabilis HI4320 - MFS transporter

Distribution of group_3675 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_3675 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_3675

Orthogroup content: 4 members

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This page summarizes the annotation of all members of the orthologous group group_3675.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 4

Product

# Product Occurence
1 MFS transporter 4

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2211 3 G Carbohydrate transport and metabolism (G) Na+/melibiose symporter or related transporter
COG2814 1 G Carbohydrate transport and metabolism (G) Predicted arabinose efflux permease AraJ, MFS family

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K05373 4 MFS transporter, putative signal transducer - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF07690 4 Major Facilitator Superfamily

Virulence factor Annotation(s)

VF gene ID Occurences Protein VF ID Category
VFG044297 4 MFS transporter VF1251 Nutritional/Metabolic factor

Annotations of the 29 SwissProt hits

Annotation Number of occurrences
Acetyl-coenzyme A transporter 1 3
Anhydromuropeptide permease 2
Major facilitator superfamily domain-containing protein 3 3
Putative transporter AmpG 1 5
Putative transporter AmpG 2 5
Putative transporter AmpG 3 5
Putative transporter AmpG 4 3
Schizokinen exporter SchE 1
Uncharacterized membrane protein YBR220C 1
Uncharacterized protein HI_0350 1

Protein length

Min length 409
Max length 437
Mean length (sd) 416.0 (14.0)
Median length 409.0

Protein length distribution