Orthogroup:group_3577


Homologs in group_3577

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_19315 FBDBKF_19315 Morganella morganii S1 pbpC penicillin-binding protein 1C
EHELCC_07600 EHELCC_07600 Morganella morganii S2 pbpC penicillin-binding protein 1C
NLDBIP_07925 NLDBIP_07925 Morganella morganii S4 pbpC penicillin-binding protein 1C
LHKJJB_07460 LHKJJB_07460 Morganella morganii S3 pbpC penicillin-binding protein 1C
HKOGLL_03470 HKOGLL_03470 Morganella morganii S5 pbpC penicillin-binding protein 1C

Distribution of group_3577 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_3577 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_3577

Orthogroup content: 5 members

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This page summarizes the annotation of all members of the orthologous group group_3577.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 pbpC 5

Product

# Product Occurence
1 penicillin-binding protein 1C 5

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG4953 5 M Cell wall/membrane/envelope biogenesis (M) Membrane carboxypeptidase/penicillin-binding protein PbpC

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K05367 5 penicillin-binding protein 1C [EC:2.4.99.28] Peptidoglycan biosynthesis
Metabolic pathways		 -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00905 5 Penicillin binding protein transpeptidase domain
PF00912 5 Transglycosylase
PF06832 5 Penicillin-Binding Protein C-terminus Family

Annotations of the 239 SwissProt hits

Annotation Number of occurrences
Biosynthetic peptidoglycan transglycosylase 167
Biosynthetic peptidoglycan transglycosylase (Fragment) 1
Monofunctional glycosyltransferase 18
Penicillin-binding protein 1A 32
Penicillin-binding protein 1A (Fragment) 1
Penicillin-binding protein 1A/1B 1
Penicillin-binding protein 1B 5
Penicillin-binding protein 1C 1
Penicillin-binding protein 1F 1
Penicillin-binding protein 2D 1
Penicillin-binding protein 2a 2
Penicillin-binding protein 4 1
Peptidoglycan D,D-transpeptidase FtsI 6
Probable peptidoglycan D,D-transpeptidase PenA (Fragment) 1
Putative transglycosylase H16_A0665 1

Protein length

Unique protein length 786

Protein length distribution