Orthogroup:group_346


Homologs in group_346

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8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_12050 FBDBKF_12050 Morganella morganii S1 spoT bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase
EHELCC_14255 EHELCC_14255 Morganella morganii S2 spoT bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase
NLDBIP_15350 NLDBIP_15350 Morganella morganii S4 spoT bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase
LHKJJB_15260 LHKJJB_15260 Morganella morganii S3 spoT bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase
HKOGLL_14380 HKOGLL_14380 Morganella morganii S5 spoT bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase
F4V73_RS14595 F4V73_RS14595 Morganella psychrotolerans spoT bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase
F4V73_RS17820 F4V73_RS17820 Morganella psychrotolerans - HD domain-containing protein
PMI_RS14155 PMI_RS14155 Proteus mirabilis HI4320 spoT bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase

Distribution of group_346 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_346 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_346

Orthogroup content: 8 members

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This page summarizes the annotation of all members of the orthologous group group_346.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 spoT 7
2 - 1

Product

# Product Occurence
1 bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase 7
2 HD domain-containing protein 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0317 8 TK Signal transduction mechanisms (T)
Transcription (K)		 (p)ppGpp synthase/hydrolase, HD superfamily

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K01139 7 GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] Purine metabolism
Metabolic pathways		 -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF02824 7 TGS domain
PF04607 7 Region found in RelA / SpoT proteins
PF13291 7 ACT domain
PF13328 8 HD domain
PF19296 7 RelA/SpoT, AH and RIS domains

Annotations of the 61 SwissProt hits

Annotation Number of occurrences
Bifunctional (p)ppGpp synthase/hydrolase RelA 3
Bifunctional (p)ppGpp synthase/hydrolase SpoT 1
GTP diphosphokinase CRSH1, chloroplastic 1
GTP diphosphokinase CRSH2, chloroplastic 1
GTP diphosphokinase CRSH3, chloroplastic 1
GTP pyrophosphokinase 19
GTP pyrophosphokinase YwaC 1
GTP pyrophosphokinase rsh 5
Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase 7
Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1 5
Probable GTP diphosphokinase CRSH, chloroplastic 1
Probable GTP diphosphokinase RSH2, chloroplastic 3
Probable GTP diphosphokinase RSH3, chloroplastic 3
Probable GTP pyrophosphokinase 2
Probable guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase 3
Putative GTP diphosphokinase RSH1, chloroplastic 3
Putative ankyrin repeat protein RF_0381 1
Uncharacterized 19.2 kDa protein in cobO 3'region 1

Protein length

Min length 302
Max length 708
Mean length (sd) 652.0 (141.4)
Median length 701.0

Protein length distribution