Orthogroup:group_3453



Homologs in group_3453

Help

5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_15610 FBDBKF_15610 Morganella morganii S1 xerC Tyrosine recombinase XerC
EHELCC_15970 EHELCC_15970 Morganella morganii S2 xerC Tyrosine recombinase XerC
NLDBIP_16400 NLDBIP_16400 Morganella morganii S4 xerC Tyrosine recombinase XerC
LHKJJB_16405 LHKJJB_16405 Morganella morganii S3 xerC Tyrosine recombinase XerC
HKOGLL_16175 HKOGLL_16175 Morganella morganii S5 xerC Tyrosine recombinase XerC

Distribution of group_3453 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_3453 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_3453

Orthogroup content: 5 members

Help

This page summarizes the annotation of all members of the orthologous group group_3453.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 xerC 5

Product

# Product Occurence
1 Tyrosine recombinase XerC 5

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG4974 5 L Replication, recombination and repair (L) Site-specific recombinase XerD

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00589 5 Phage integrase family
PF13102 5 Phage integrase SAM-like domain
PF17293 5 Arm DNA-binding domain

Annotations of the 200 SwissProt hits

Annotation Number of occurrences
Integrase 4
Integrase/recombinase 3
Prophage integrase IntD 1
Putative integrase 1
Putative integrase/recombinase y4qK 1
Putative integrase/recombinase y4rC 1
Putative tyrosine recombinase CA_C2066 1
Tyrosine recombinase EUBREC_2677 1
Tyrosine recombinase THA_404 1
Tyrosine recombinase Tlet_1492 1
Tyrosine recombinase XerA 7
Tyrosine recombinase XerC 124
Tyrosine recombinase XerC-like 1
Tyrosine recombinase XerD 53

Protein length

Unique protein length 389

Protein length distribution