Orthogroup:group_3390


Homologs in group_3390

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_13205 FBDBKF_13205 Morganella morganii S1 - Helix-turn-helix domain-containing protein
EHELCC_08890 EHELCC_08890 Morganella morganii S2 - Helix-turn-helix domain-containing protein
NLDBIP_09215 NLDBIP_09215 Morganella morganii S4 - Helix-turn-helix domain-containing protein
LHKJJB_05050 LHKJJB_05050 Morganella morganii S3 - Helix-turn-helix domain-containing protein
HKOGLL_05865 HKOGLL_05865 Morganella morganii S5 - Helix-turn-helix domain-containing protein

Distribution of group_3390 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_3390 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_3390

Orthogroup content: 5 members

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This page summarizes the annotation of all members of the orthologous group group_3390.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 5

Product

# Product Occurence
1 Helix-turn-helix domain-containing protein 5

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1974 5 KT Transcription (K)
Signal transduction mechanisms (T)		 SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00717 5 Peptidase S24-like
PF01381 5 Helix-turn-helix

Annotations of the 16 SwissProt hits

Annotation Number of occurrences
HTH-type transcriptional regulator RdgA 1
HTH-type transcriptional regulator for conjugative element R391 1
HTH-type transcriptional regulator for conjugative element SXT 1
HTH-type transcriptional regulator for conjugative element pMERPH 1
LexA repressor 4
LexA repressor 1 1
Prophage repressor CohE 1
Regulatory protein cro 1
Repressor protein C2 1
Repressor protein CI (Fragment) 1
Repressor protein cI 1
Uncharacterized HTH-type transcriptional regulator CBU_1416 1
Uncharacterized HTH-type transcriptional regulator MTH_1328 1

Protein length

Unique protein length 258

Protein length distribution