Orthogroup:group_3310


Homologs in group_3310

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_10780 FBDBKF_10780 Morganella morganii S1 fimC P pilus assembly protein, chaperone PapD
EHELCC_15115 EHELCC_15115 Morganella morganii S2 fimC P pilus assembly protein, chaperone PapD
NLDBIP_14945 NLDBIP_14945 Morganella morganii S4 fimC P pilus assembly protein, chaperone PapD
LHKJJB_14400 LHKJJB_14400 Morganella morganii S3 fimC P pilus assembly protein, chaperone PapD
HKOGLL_13020 HKOGLL_13020 Morganella morganii S5 fimC P pilus assembly protein, chaperone PapD

Distribution of group_3310 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_3310 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_3310

Orthogroup content: 5 members

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This page summarizes the annotation of all members of the orthologous group group_3310.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 fimC 5

Product

# Product Occurence
1 P pilus assembly protein, chaperone PapD 5

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3121 5 W Extracellular structures (W) P pilus assembly protein, chaperone PapD

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00345 5 Pili and flagellar-assembly chaperone, PapD N-terminal domain
PF02753 5 Pili assembly chaperone PapD, C-terminal domain

Annotations of the 38 SwissProt hits

Annotation Number of occurrences
Chaperone protein AfaB 1
Chaperone protein AggD 1
Chaperone protein CS3-1 1
Chaperone protein ClpE 1
Chaperone protein CssC 2
Chaperone protein FaeE 1
Chaperone protein FanE 1
Chaperone protein FimB/FhaD 1
Chaperone protein FimC 3
Chaperone protein FocC 2
Chaperone protein HifB 2
Chaperone protein LpfB 1
Chaperone protein MrkB 1
Chaperone protein MyfB 1
Chaperone protein NfaE 1
Chaperone protein PapD 1
Chaperone protein PmfD 1
Chaperone protein PrsD (Fragment) 1
Chaperone protein PsaB 2
Chaperone protein SefB 1
Chaperone protein caf1M 1
Probable fimbrial chaperone LpfB 1
Probable fimbrial chaperone SfmC 1
Probable fimbrial chaperone YadV 1
Probable fimbrial chaperone YehC 1
Probable fimbrial chaperone YfcS 1
Probable fimbrial chaperone YraI 1
Probable fimbrial chaperone protein ElfD 2
Uncharacterized fimbrial chaperone YbgP 1
Uncharacterized fimbrial chaperone YcbF 1
Uncharacterized fimbrial chaperone YqiH 1

Protein length

Unique protein length 229

Protein length distribution