Orthogroup:group_3305


Homologs in group_3305

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_10280 FBDBKF_10280 Morganella morganii S1 - Restriction endonuclease subunit S
EHELCC_14615 EHELCC_14615 Morganella morganii S2 - Restriction endonuclease subunit S
NLDBIP_14445 NLDBIP_14445 Morganella morganii S4 - Restriction endonuclease subunit S
LHKJJB_14900 LHKJJB_14900 Morganella morganii S3 - Restriction endonuclease subunit S
HKOGLL_13520 HKOGLL_13520 Morganella morganii S5 - Restriction endonuclease subunit S

Distribution of group_3305 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_3305 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_3305

Orthogroup content: 5 members

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This page summarizes the annotation of all members of the orthologous group group_3305.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 5

Product

# Product Occurence
1 Restriction endonuclease subunit S 5

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0732 5 V Defense mechanisms (V) Restriction endonuclease S subunit

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K01154 5 type I restriction enzyme, S subunit [EC:3.1.21.3] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01420 5 Type I restriction modification DNA specificity domain

Annotations of the 7 SwissProt hits

Annotation Number of occurrences
Type I restriction enzyme EcoAI specificity subunit 1
Type I restriction enzyme EcoEI specificity subunit 1
Type I restriction enzyme EcoR124I/EcoR124II specificity subunit 1
Type I restriction enzyme HindI specificity subunit 1
Type I restriction enzyme MjaIX specificity subunit 1
Type I restriction enzyme MjaVII specificity subunit 1
Type I restriction enzyme StySJI specificity subunit 1

Protein length

Unique protein length 582

Protein length distribution