Orthogroup:group_3304


Homologs in group_3304

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_10275 FBDBKF_10275 Morganella morganii S1 hsdM Type I restriction-modification system, DNA methylase subunit
EHELCC_14610 EHELCC_14610 Morganella morganii S2 hsdM Type I restriction-modification system, DNA methylase subunit
NLDBIP_14440 NLDBIP_14440 Morganella morganii S4 hsdM Type I restriction-modification system, DNA methylase subunit
LHKJJB_14905 LHKJJB_14905 Morganella morganii S3 hsdM Type I restriction-modification system, DNA methylase subunit
HKOGLL_13525 HKOGLL_13525 Morganella morganii S5 hsdM Type I restriction-modification system, DNA methylase subunit

Distribution of group_3304 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_3304 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_3304

Orthogroup content: 5 members

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This page summarizes the annotation of all members of the orthologous group group_3304.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 hsdM 5

Product

# Product Occurence
1 Type I restriction-modification system, DNA methylase subunit 5

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0286 5 V Defense mechanisms (V) Type I restriction-modification system, DNA methylase subunit

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03427 5 type I restriction enzyme M protein [EC:2.1.1.72] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF02384 5 N-6 DNA Methylase
PF12161 5 HsdM N-terminal domain

Annotations of the 14 SwissProt hits

Annotation Number of occurrences
Type I restriction enzyme BthVORF4518P methylase subunit 1
Type I restriction enzyme EcoEI methylase subunit 1
Type I restriction enzyme EcoKI methylase subunit 1
Type I restriction enzyme EcoR124I/EcoR124II methylase subunit 1
Type I restriction enzyme EcoprrI methylase subunit 1
Type I restriction enzyme HindI methylase subunit 1
Type I restriction enzyme MjaIX methylase subunit 1
Type I restriction enzyme MjaVII methylase subunit 1
Type I restriction enzyme MjaVIII methylase subunit 1
Type I restriction enzyme MpnII methylase subunit 1
Type I restriction enzyme StySJI methylase subunit 1
Type I restriction enzyme StySPI methylase subunit 1
Type II methyltransferase M.MamI 1
Type II restriction enzyme and methyltransferase RM.BcgI 1

Protein length

Unique protein length 477

Protein length distribution