Orthogroup:group_3303


Homologs in group_3303

Help

5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_10270 FBDBKF_10270 Morganella morganii S1 hsdR Type I restriction enzyme EcoEI endonuclease subunit
EHELCC_14605 EHELCC_14605 Morganella morganii S2 hsdR Type I restriction enzyme EcoEI endonuclease subunit
NLDBIP_14435 NLDBIP_14435 Morganella morganii S4 hsdR Type I restriction enzyme EcoEI endonuclease subunit
LHKJJB_14910 LHKJJB_14910 Morganella morganii S3 hsdR Type I restriction enzyme EcoEI endonuclease subunit
HKOGLL_13530 HKOGLL_13530 Morganella morganii S5 hsdR Type I restriction enzyme EcoEI endonuclease subunit

Distribution of group_3303 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_3303 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_3303

Orthogroup content: 5 members

Help

This page summarizes the annotation of all members of the orthologous group group_3303.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 hsdR 5

Product

# Product Occurence
1 Type I restriction enzyme EcoEI endonuclease subunit 5

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG4096 5 V Defense mechanisms (V) Type I site-specific restriction endonuclease, part of a restriction-modification system

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K01153 5 type I restriction enzyme, R subunit [EC:3.1.21.3] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00271 5 Helicase conserved C-terminal domain
PF04313 5 Type I restriction enzyme R protein N terminus (HSDR_N)
PF04851 5 Type III restriction enzyme, res subunit
PF08463 5 EcoEI R protein C-terminal

Annotations of the 21 SwissProt hits

Annotation Number of occurrences
Interferon-induced helicase C domain-containing protein 1 1
Probable helicase A859L 5
Putative ATP-dependent RNA helicase MJ1505 1
Putative ATP-dependent helicase IRC3 1
Putative DNA repair helicase RadD 1
Putative mitochondrial ATP-dependent helicase irc3 1
Type I restriction enzyme EcoAI endonuclease subunit 1
Type I restriction enzyme EcoEI endonuclease subunit 1
Type I restriction enzyme EcoKI endonuclease subunit 1
Type I restriction enzyme SauCOLORF180P endonuclease subunit 1
Type I restriction enzyme SauMRSORF196P endonuclease subunit 1
Type I restriction enzyme SauMSSORF170P endonuclease subunit 1
Type I restriction enzyme SauMW2ORF169P endonuclease subunit 1
Type I restriction enzyme SauMu50ORF195P endonuclease subunit 1
Type I restriction enzyme SauN315I endonuclease subunit 1
Type I restriction enzyme SepRPIP endonuclease subunit 1
Type I restriction enzyme SsaAORF53P endonuclease subunit 1

Protein length

Unique protein length 810

Protein length distribution