Orthogroup:group_326


Homologs in group_326

Help

8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_09805 FBDBKF_09805 Morganella morganii S1 sucD succinate--CoA ligase subunit alpha
EHELCC_04605 EHELCC_04605 Morganella morganii S2 sucD succinate--CoA ligase subunit alpha
NLDBIP_04605 NLDBIP_04605 Morganella morganii S4 sucD succinate--CoA ligase subunit alpha
LHKJJB_14025 LHKJJB_14025 Morganella morganii S3 sucD succinate--CoA ligase subunit alpha
HKOGLL_12510 HKOGLL_12510 Morganella morganii S5 sucD succinate--CoA ligase subunit alpha
F4V73_RS00540 F4V73_RS00540 Morganella psychrotolerans sucD succinate--CoA ligase subunit alpha
PMI_RS02815 PMI_RS02815 Proteus mirabilis HI4320 sucD succinate--CoA ligase subunit alpha
PMI_RS10850 PMI_RS10850 Proteus mirabilis HI4320 - acyl-CoA synthetase FdrA

Distribution of group_326 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_326 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_326

Orthogroup content: 8 members

Help

This page summarizes the annotation of all members of the orthologous group group_326.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 sucD 7
2 - 1

Product

# Product Occurence
1 succinate--CoA ligase subunit alpha 7
2 acyl-CoA synthetase FdrA 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0074 8 C Energy production and conversion (C) Succinyl-CoA synthetase, alpha subunit

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00549 8 CoA-ligase
PF02629 8 CoA binding domain

Annotations of the 72 SwissProt hits

Annotation Number of occurrences
3-hydroxypropionate--CoA ligase [ADP-forming] 1
4-hydroxybutyrate--CoA ligase [ADP-forming] 1
ADP-forming sulfoacetate-CoA ligase subunit SauD 1
ADP-forming sulfoacetate-CoA ligase subunit SqwL 1
ATP-citrate synthase 5
ATP-citrate synthase beta chain protein 1 2
ATP-citrate synthase beta chain protein 2 1
ATP-citrate synthase subunit 1 1
Acetate--CoA ligase [ADP-forming] I subunit alpha 1
Acetate--CoA ligase [ADP-forming] II subunit alpha 1
Malate--CoA ligase subunit alpha 1
Probable ATP-citrate synthase 2
Probable ATP-citrate synthase subunit 1 2
Protein FdrA 1
Succinate--CoA ligase [ADP-forming] subunit alpha 27
Succinate--CoA ligase [ADP-forming] subunit alpha 1 1
Succinate--CoA ligase [ADP-forming] subunit alpha 2 1
Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial 4
Succinate--CoA ligase [ADP-forming] subunit alpha-1, mitochondrial 3
Succinate--CoA ligase [ADP-forming] subunit alpha-2, mitochondrial 3
Succinate--CoA ligase [ADP-forming] subunit alpha-3, mitochondrial 1
Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial 8
Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial (Fragment) 1
Succinate--CoA ligase [GDP-forming] subunit alpha 1
Uncharacterized protein YahF 1

Protein length

Min length 290
Max length 555
Mean length (sd) 323.1 (93.7)
Median length 290.0

Protein length distribution