Orthogroup:group_3252



Homologs in group_3252

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_05550 FBDBKF_05550 Morganella morganii S1 hipB Transcriptional regulator, contains XRE-family HTH domain
EHELCC_12040 EHELCC_12040 Morganella morganii S2 hipB Transcriptional regulator, contains XRE-family HTH domain
NLDBIP_12380 NLDBIP_12380 Morganella morganii S4 hipB Transcriptional regulator, contains XRE-family HTH domain
LHKJJB_12240 LHKJJB_12240 Morganella morganii S3 hipB Transcriptional regulator, contains XRE-family HTH domain
HKOGLL_10855 HKOGLL_10855 Morganella morganii S5 hipB Transcriptional regulator, contains XRE-family HTH domain

Distribution of group_3252 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_3252 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_3252

Orthogroup content: 5 members

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This page summarizes the annotation of all members of the orthologous group group_3252.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 hipB 5

Product

# Product Occurence
1 Transcriptional regulator, contains XRE-family HTH domain 5

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1396 5 K Transcription (K) Transcriptional regulator, contains XRE-family HTH domain

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01381 5 Helix-turn-helix

Annotations of the 6 SwissProt hits

Annotation Number of occurrences
Uncharacterized HTH-type transcriptional regulator R00410 1
Uncharacterized HTH-type transcriptional regulator RC0668 1
Uncharacterized HTH-type transcriptional regulator RP497 1
Uncharacterized HTH-type transcriptional regulator Smed_0045 1
Uncharacterized HTH-type transcriptional regulator y4wC 1
Uncharacterized transcriptional regulator in ATPase CF(0) region 1

Protein length

Unique protein length 113

Protein length distribution