Orthogroup:group_325


Homologs in group_325

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8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_09760 FBDBKF_09760 Morganella morganii S1 ybgC tol-pal system-associated acyl-CoA thioesterase
EHELCC_04560 EHELCC_04560 Morganella morganii S2 ybgC tol-pal system-associated acyl-CoA thioesterase
NLDBIP_04560 NLDBIP_04560 Morganella morganii S4 ybgC tol-pal system-associated acyl-CoA thioesterase
LHKJJB_14070 LHKJJB_14070 Morganella morganii S3 ybgC tol-pal system-associated acyl-CoA thioesterase
HKOGLL_12465 HKOGLL_12465 Morganella morganii S5 ybgC tol-pal system-associated acyl-CoA thioesterase
F4V73_RS00580 F4V73_RS00580 Morganella psychrotolerans ybgC tol-pal system-associated acyl-CoA thioesterase
F4V73_RS11980 F4V73_RS11980 Morganella psychrotolerans - thioesterase family protein
PMI_RS02850 PMI_RS02850 Proteus mirabilis HI4320 ybgC tol-pal system-associated acyl-CoA thioesterase

Distribution of group_325 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_325 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_325

Orthogroup content: 8 members

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This page summarizes the annotation of all members of the orthologous group group_325.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 ybgC 7
2 - 1

Product

# Product Occurence
1 tol-pal system-associated acyl-CoA thioesterase 7
2 thioesterase family protein 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0824 8 I Lipid transport and metabolism (I) Acyl-CoA thioesterase FadM

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K07107 8 acyl-CoA thioester hydrolase [EC:3.1.2.-] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF03061 6 Thioesterase superfamily
PF13279 2 Thioesterase-like superfamily

Annotations of the 14 SwissProt hits

Annotation Number of occurrences
1,4-dihydroxy-2-naphthoyl-CoA hydrolase 2
4-hydroxybenzoyl-CoA thioesterase 1
Acyl-CoA thioester hydrolase YbgC 4
Acyl-CoA thioesterase YbgC 3
Long-chain acyl-CoA thioesterase FadM 1
Putative acyl-CoA thioesterase YneP 1
Putative esterase aq_1494 1
Putative esterase sll0410 1

Protein length

Min length 130
Max length 140
Mean length (sd) 131.4 (3.5)
Median length 130.0

Protein length distribution