Orthogroup:group_3219



Homologs in group_3219

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_02920 FBDBKF_02920 Morganella morganii S1 alkB DNA oxidative demethylase AlkB
EHELCC_03390 EHELCC_03390 Morganella morganii S2 alkB DNA oxidative demethylase AlkB
NLDBIP_00070 NLDBIP_00070 Morganella morganii S4 alkB DNA oxidative demethylase AlkB
LHKJJB_01965 LHKJJB_01965 Morganella morganii S3 alkB DNA oxidative demethylase AlkB
HKOGLL_02005 HKOGLL_02005 Morganella morganii S5 alkB DNA oxidative demethylase AlkB

Distribution of group_3219 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_3219 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_3219

Orthogroup content: 5 members

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This page summarizes the annotation of all members of the orthologous group group_3219.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 alkB 5

Product

# Product Occurence
1 DNA oxidative demethylase AlkB 5

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3145 5 L Replication, recombination and repair (L) Alkylated DNA repair dioxygenase AlkB

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03919 5 DNA oxidative demethylase [EC:1.14.11.33] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF13532 5 2OG-Fe(II) oxygenase superfamily

Annotations of the 12 SwissProt hits

Annotation Number of occurrences
Alpha-ketoglutarate-dependent dioxygenase AlkB 2
Alpha-ketoglutarate-dependent dioxygenase AlkB homolog 2
Alpha-ketoglutarate-dependent dioxygenase abh1 1
Alpha-ketoglutarate-dependent dioxygenase alkB 1
DNA N(6)-methyladenine demethylase ALKBH1A 1
DNA N(6)-methyladenine demethylase ALKBH1C 1
DNA N(6)-methyladenine demethylase ALKBH1D 1
Nucleic acid dioxygenase ALKBH1 2
Probable DNA N(6)-methyladenine demethylase ALKBH1B 1

Protein length

Unique protein length 211

Protein length distribution