Orthogroup:group_3130



Homologs in group_3130

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_20120 FBDBKF_20120 Morganella morganii S1 hxlR DNA-binding transcriptional regulator, HxlR family
EHELCC_19345 EHELCC_19345 Morganella morganii S2 hxlR DNA-binding transcriptional regulator, HxlR family
NLDBIP_19475 NLDBIP_19475 Morganella morganii S4 hxlR DNA-binding transcriptional regulator, HxlR family
LHKJJB_19475 LHKJJB_19475 Morganella morganii S3 hxlR DNA-binding transcriptional regulator, HxlR family
HKOGLL_19355 HKOGLL_19355 Morganella morganii S5 hxlR DNA-binding transcriptional regulator, HxlR family
PMI_RS04760 PMI_RS04760 Proteus mirabilis HI4320 - helix-turn-helix domain-containing protein

Distribution of group_3130 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_3130 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_3130

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_3130.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 hxlR 5
2 - 1

Product

# Product Occurence
1 DNA-binding transcriptional regulator, HxlR family 5
2 helix-turn-helix domain-containing protein 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1733 6 K Transcription (K) DNA-binding transcriptional regulator, HxlR family

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01638 6 HxlR-like helix-turn-helix

Annotations of the 17 SwissProt hits

Annotation Number of occurrences
HTH-type transcriptional activator HxlR 1
HTH-type transcriptional regulator YodB 1
Putative regulatory protein MalR 1
Uncharacterized HTH-type transcriptional regulator BH0655 1
Uncharacterized HTH-type transcriptional regulator MT3179 1
Uncharacterized HTH-type transcriptional regulator MTH_1285 1
Uncharacterized HTH-type transcriptional regulator Mb3122 1
Uncharacterized HTH-type transcriptional regulator Rv3095 1
Uncharacterized HTH-type transcriptional regulator YdeP 1
Uncharacterized HTH-type transcriptional regulator YdzF 1
Uncharacterized HTH-type transcriptional regulator YkvN 1
Uncharacterized HTH-type transcriptional regulator YtcD 1
Uncharacterized HTH-type transcriptional regulator YtfH 2
Uncharacterized HTH-type transcriptional regulator YvaP 1
Uncharacterized HTH-type transcriptional regulator YybR 1
Uncharacterized HTH-type transcriptional regulator sll1512 1

Protein length

Min length 124
Max length 126
Mean length (sd) 125.7 (0.8)
Median length 126.0

Protein length distribution