Orthogroup:group_3126


Homologs in group_3126

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_20015 FBDBKF_20015 Morganella morganii S1 - Type-1A pilin
EHELCC_03515 EHELCC_03515 Morganella morganii S2 - Type-1A pilin
NLDBIP_03515 NLDBIP_03515 Morganella morganii S4 - Type-1A pilin
LHKJJB_09345 LHKJJB_09345 Morganella morganii S3 - Type-1A pilin
HKOGLL_09630 HKOGLL_09630 Morganella morganii S5 - Type-1A pilin
PMI_RS07105 PMI_RS07105 Proteus mirabilis HI4320 - fimbrial protein

Distribution of group_3126 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_3126 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_3126

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_3126.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 6

Product

# Product Occurence
1 Type-1A pilin 5
2 fimbrial protein 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3539 6 N Cell motility (N) Pilin (type 1 fimbrial protein)

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K07351 6 fimbrial protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00419 6 Fimbrial protein

Annotations of the 39 SwissProt hits

Annotation Number of occurrences
F17 fimbrial protein 1
Fimbria A protein 1
Fimbrial subunit ElfA 1
Fimbrial subunit type 1 3
Fimbrial-like protein FimF 1
Fimbrin-like protein FimI 2
Laminin-binding fimbrial subunit ElfA 1
Long polar fimbria protein A 1
Major MR/P fimbria protein 1
Major fimbrial subunit 3
Pap fimbrial major pilin protein 1
Probable fimbrial subunit LpfE 1
Probable major fimbrial subunit LpfA 1
Protein FimF 1
Protein LpfE 1
Putative fimbrin-like protein FimI 1
Putative minor fimbrial subunit PmfF 1
S-fimbrial protein subunit SfaA 1
S-fimbrial protein subunit SfaG 1
Type-1 fimbrial protein subunit 1
Type-1 fimbrial protein, A chain 4
Type-1 fimbrial protein, C chain 2
Uncharacterized fimbrial-like protein SfmA 2
Uncharacterized fimbrial-like protein SfmF 1
Uncharacterized fimbrial-like protein YbgD 1
Uncharacterized fimbrial-like protein YcbU 1
Uncharacterized fimbrial-like protein YcbV 1
Uncharacterized fimbrial-like protein YdeS 1
Uncharacterized fimbrial-like protein YraH 1

Protein length

Unique protein length 180

Protein length distribution