Orthogroup:group_3107



Homologs in group_3107

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_19630 FBDBKF_19630 Morganella morganii S1 alaX Ser-tRNA(Ala) deacylase AlaX (editing enzyme)
EHELCC_16920 EHELCC_16920 Morganella morganii S2 alaX Ser-tRNA(Ala) deacylase AlaX (editing enzyme)
NLDBIP_17530 NLDBIP_17530 Morganella morganii S4 alaX Ser-tRNA(Ala) deacylase AlaX (editing enzyme)
LHKJJB_17450 LHKJJB_17450 Morganella morganii S3 alaX Ser-tRNA(Ala) deacylase AlaX (editing enzyme)
HKOGLL_17265 HKOGLL_17265 Morganella morganii S5 alaX Ser-tRNA(Ala) deacylase AlaX (editing enzyme)
F4V73_RS10425 F4V73_RS10425 Morganella psychrotolerans - metal-dependent hydrolase

Distribution of group_3107 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_3107 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_3107

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_3107.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 alaX 5
2 - 1

Product

# Product Occurence
1 Ser-tRNA(Ala) deacylase AlaX (editing enzyme) 5
2 metal-dependent hydrolase 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2872 6 J Translation, ribosomal structure and biogenesis (J) Ser-tRNA(Ala) deacylase AlaX (editing enzyme)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF07973 6 Threonyl and Alanyl tRNA synthetase second additional domain

Annotations of the 170 SwissProt hits

Annotation Number of occurrences
Alanine--tRNA ligase 156
Alanyl-tRNA editing protein Aarsd1 5
Alanyl-tRNA editing protein Aarsd1-A 1
Alanyl-tRNA editing protein Aarsd1-B 1
Alanyl-tRNA editing protein AlaX-L 1
Alanyl-tRNA editing protein AlaX-M 5
Putative alanyl-tRNA editing protein alaX 1

Protein length

Unique protein length 210

Protein length distribution