Orthogroup:group_3100


Homologs in group_3100

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_19400 FBDBKF_19400 Morganella morganii S1 - phage major capsid protein
EHELCC_19260 EHELCC_19260 Morganella morganii S2 - phage major capsid protein
NLDBIP_19390 NLDBIP_19390 Morganella morganii S4 - phage major capsid protein
LHKJJB_19415 LHKJJB_19415 Morganella morganii S3 - phage major capsid protein
HKOGLL_19195 HKOGLL_19195 Morganella morganii S5 - phage major capsid protein
PMI_RS04545 PMI_RS04545 Proteus mirabilis HI4320 - phage major capsid protein

Distribution of group_3100 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_3100 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_3100

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_3100.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 6

Product

# Product Occurence
1 phage major capsid protein 6

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG4653 6 X Mobilome: prophages, transposons (X) Predicted phage phi-C31 gp36 major capsid-like protein

Pfam domain Annotation(s)

Domain ID Occurences Description
PF05065 6 Phage capsid family

Annotations of the 1 SwissProt hits

Annotation Number of occurrences
Major capsid protein 1

Protein length

Min length 388
Max length 404
Mean length (sd) 401.3 (6.5)
Median length 404.0

Protein length distribution