Orthogroup:group_3056


Homologs in group_3056

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_18265 FBDBKF_18265 Morganella morganii S1 hgdB double-cubane-cluster-containing anaerobic reductase
EHELCC_18300 EHELCC_18300 Morganella morganii S2 hgdB double-cubane-cluster-containing anaerobic reductase
NLDBIP_18225 NLDBIP_18225 Morganella morganii S4 hgdB double-cubane-cluster-containing anaerobic reductase
LHKJJB_18420 LHKJJB_18420 Morganella morganii S3 hgdB double-cubane-cluster-containing anaerobic reductase
HKOGLL_18155 HKOGLL_18155 Morganella morganii S5 hgdB double-cubane-cluster-containing anaerobic reductase
F4V73_RS01790 F4V73_RS01790 Morganella psychrotolerans - double-cubane-cluster-containing anaerobic reductase

Distribution of group_3056 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_3056 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_3056

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_3056.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 hgdB 5
2 - 1

Product

# Product Occurence
1 double-cubane-cluster-containing anaerobic reductase 6

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1775 6 EQ Amino acid transport and metabolism (E)
Secondary metabolites biosynthesis, transport and catabolism (Q)		 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB

Pfam domain Annotation(s)

Domain ID Occurences Description
PF06050 6 2-hydroxyglutaryl-CoA dehydratase, D-component

Annotations of the 7 SwissProt hits

Annotation Number of occurrences
(R)-2-hydroxyglutaryl-CoA dehydratase, subunit beta 1
(R)-2-hydroxyisocaproyl-CoA dehydratase beta subunit 1
(R)-phenyllactyl-CoA dehydratase beta subunit 1
Benzoyl-CoA reductase subunit B 1
Lactoyl-CoA dehydratase subunit beta (Fragment) 1
Putative dehydratase subunit MJ0007 1
Putative dehydratase subunit YjiM 1

Protein length

Unique protein length 385

Protein length distribution