Orthogroup:group_3040


Homologs in group_3040

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_18140 FBDBKF_18140 Morganella morganii S1 fimA Pilin (type 1 fimbrial protein)
EHELCC_16840 EHELCC_16840 Morganella morganii S2 fimA Pilin (type 1 fimbrial protein)
NLDBIP_17610 NLDBIP_17610 Morganella morganii S4 fimA Pilin (type 1 fimbrial protein)
LHKJJB_17530 LHKJJB_17530 Morganella morganii S3 fimA Pilin (type 1 fimbrial protein)
HKOGLL_17345 HKOGLL_17345 Morganella morganii S5 fimA Pilin (type 1 fimbrial protein)
F4V73_RS10345 F4V73_RS10345 Morganella psychrotolerans - fimbrial protein

Distribution of group_3040 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_3040 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_3040

Orthogroup content: 6 members

Help

This page summarizes the annotation of all members of the orthologous group group_3040.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 fimA 5
2 - 1

Product

# Product Occurence
1 Pilin (type 1 fimbrial protein) 5
2 fimbrial protein 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3539 6 N Cell motility (N) Pilin (type 1 fimbrial protein)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00419 6 Fimbrial protein

Annotations of the 2 SwissProt hits

Annotation Number of occurrences
Minor fimbrial protein PrsF 1
Uncharacterized fimbrial-like protein YfcQ 1

Protein length

Min length 161
Max length 163
Mean length (sd) 162.7 (0.8)
Median length 163.0

Protein length distribution