Orthogroup:group_2996



Homologs in group_2996

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_17335 FBDBKF_17335 Morganella morganii S1 lexA SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)
EHELCC_01555 EHELCC_01555 Morganella morganii S2 lexA SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)
NLDBIP_01905 NLDBIP_01905 Morganella morganii S4 lexA SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)
LHKJJB_00130 LHKJJB_00130 Morganella morganii S3 lexA SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)
HKOGLL_00170 HKOGLL_00170 Morganella morganii S5 lexA SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)
PMI_RS12280 PMI_RS12280 Proteus mirabilis HI4320 umuD translesion error-prone DNA polymerase V autoproteolytic subunit

Distribution of group_2996 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2996 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2996

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_2996.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 lexA 5
2 umuD 1

Product

# Product Occurence
1 SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase) 5
2 translesion error-prone DNA polymerase V autoproteolytic subunit 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1974 6 KT Transcription (K)
Signal transduction mechanisms (T)
SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03503 6 DNA polymerase V [EC:3.4.21.-] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00717 6 Peptidase S24-like

Annotations of the 471 SwissProt hits

Annotation Number of occurrences
LexA repressor 443
LexA repressor 1 7
LexA repressor 2 7
Prophage repressor CohE 1
Protein ImpA 4
Protein MucA 2
Protein SamA 1
Protein UmuD 4
Repressor protein C2 1
Uncharacterized protein HI_1546 1

Protein length

Min length 138
Max length 149
Mean length (sd) 139.8 (4.5)
Median length 138.0

Protein length distribution