Orthogroup:group_2921



Homologs in group_2921

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_13790 FBDBKF_13790 Morganella morganii S1 glpR DNA-binding transcriptional regulator of sugar metabolism, DeoR/GlpR family
EHELCC_11460 EHELCC_11460 Morganella morganii S2 glpR DNA-binding transcriptional regulator of sugar metabolism, DeoR/GlpR family
NLDBIP_11805 NLDBIP_11805 Morganella morganii S4 glpR DNA-binding transcriptional regulator of sugar metabolism, DeoR/GlpR family
LHKJJB_11665 LHKJJB_11665 Morganella morganii S3 glpR DNA-binding transcriptional regulator of sugar metabolism, DeoR/GlpR family
HKOGLL_10275 HKOGLL_10275 Morganella morganii S5 glpR DNA-binding transcriptional regulator of sugar metabolism, DeoR/GlpR family
F4V73_RS12660 F4V73_RS12660 Morganella psychrotolerans - DeoR/GlpR family DNA-binding transcription regulator

Distribution of group_2921 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2921 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2921

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_2921.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 glpR 5
2 - 1

Product

# Product Occurence
1 DNA-binding transcriptional regulator of sugar metabolism, DeoR/GlpR family 5
2 DeoR/GlpR family DNA-binding transcription regulator 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1349 6 KG Transcription (K)
Carbohydrate transport and metabolism (G)
DNA-binding transcriptional regulator of sugar metabolism, DeoR/GlpR family

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00455 6 DeoR C terminal sensor domain
PF08220 6 DeoR-like helix-turn-helix domain

Annotations of the 82 SwissProt hits

Annotation Number of occurrences
Deoxyribose operon repressor 3
Glucitol operon repressor 1
Glycerol-3-phosphate regulon repressor 4
HTH-type transcriptional regulator GlpR 1
HTH-type transcriptional regulator GolR 1
HTH-type transcriptional regulator IolR 1
HTH-type transcriptional regulator UlaR 41
HTH-type transcriptional repressor CsqR 1
HTH-type transcriptional repressor GlcR 1
HTH-type transcriptional repressor YcnK 1
L-fucose operon activator 3
Lactose phosphotransferase system repressor 11
Putative aga operon transcriptional repressor 3
Putative galactitol utilization operon repressor 1
Putative sgc region transcriptional regulator 1
Transcriptional repressor AccR 1
Uncharacterized HTH-type transcriptional regulator FruR 1
Uncharacterized HTH-type transcriptional regulator HI_1009 1
Uncharacterized HTH-type transcriptional regulator SE_1102 1
Uncharacterized HTH-type transcriptional regulator YciT 1
Uncharacterized HTH-type transcriptional regulator YdjF 1
Uncharacterized HTH-type transcriptional regulator YgbI 1
Uncharacterized HTH-type transcriptional regulator YulB 1

Protein length

Min length 251
Max length 295
Mean length (sd) 258.3 (18.0)
Median length 251.0

Protein length distribution