Orthogroup:group_2920


Homologs in group_2920

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_13785 FBDBKF_13785 Morganella morganii S1 cof Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases
EHELCC_11455 EHELCC_11455 Morganella morganii S2 cof Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases
NLDBIP_11800 NLDBIP_11800 Morganella morganii S4 cof Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases
LHKJJB_11660 LHKJJB_11660 Morganella morganii S3 cof Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases
HKOGLL_10270 HKOGLL_10270 Morganella morganii S5 cof Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases
F4V73_RS12655 F4V73_RS12655 Morganella psychrotolerans - Cof-type HAD-IIB family hydrolase

Distribution of group_2920 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2920 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2920

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_2920.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 cof 5
2 - 1

Product

# Product Occurence
1 Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases 5
2 Cof-type HAD-IIB family hydrolase 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0561 6 HR Coenzyme transport and metabolism (H)
General function prediction only (R)		 Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases

Pfam domain Annotation(s)

Domain ID Occurences Description
PF08282 6 haloacid dehalogenase-like hydrolase

Annotations of the 99 SwissProt hits

Annotation Number of occurrences
5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YcsE 1
5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YitU 1
5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YwtE 1
Endoribonuclease YBEY, chloroplastic 1
HMP-PP phosphatase 57
Mannosylfructose-phosphate phosphatase 1
Phosphatase YwpJ 1
Phosphoglycolate phosphatase 17
Phosphoglycolate phosphatase 2 1
Putative HMP-PP phosphatase 1
Putative bifunctional phosphatase/peptidyl-prolyl cis-trans isomerase 1
Putative phosphatase HI_0003 1
Putative phosphatase M6_Spy0533 1
Putative phosphatase MG265 1
Putative phosphatase MPN_383 1
Putative phosphatase MPN_427 1
Putative phosphatase YkrA 1
Putative phosphatase YxeH 1
Pyridoxal phosphate phosphatase YbhA 1
Stress response protein YhaX 1
Sugar phosphatase YbiV 1
Sugar phosphatase YidA 3
Uncharacterized hydrolase C215.10 1
Uncharacterized hydrolase C25B8.12c 1
Uncharacterized protein in pdhA 5'region (Fragment) 1

Protein length

Min length 269
Max length 272
Mean length (sd) 269.5 (1.2)
Median length 269.0

Protein length distribution