Orthogroup:group_2907



Homologs in group_2907

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_13330 FBDBKF_13330 Morganella morganii S1 sodC superoxide dismutase [Cu-Zn] SodC
EHELCC_08765 EHELCC_08765 Morganella morganii S2 sodC superoxide dismutase [Cu-Zn] SodC
NLDBIP_09090 NLDBIP_09090 Morganella morganii S4 sodC superoxide dismutase [Cu-Zn] SodC
LHKJJB_05175 LHKJJB_05175 Morganella morganii S3 sodC superoxide dismutase [Cu-Zn] SodC
HKOGLL_05740 HKOGLL_05740 Morganella morganii S5 sodC superoxide dismutase [Cu-Zn] SodC
PMI_RS06430 PMI_RS06430 Proteus mirabilis HI4320 sodC superoxide dismutase family protein

Distribution of group_2907 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2907 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2907

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_2907.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 sodC 6

Product

# Product Occurence
1 superoxide dismutase [Cu-Zn] SodC 5
2 superoxide dismutase family protein 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2032 6 P Inorganic ion transport and metabolism (P) Cu/Zn superoxide dismutase

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00080 6 Copper/zinc superoxide dismutase (SODC)

Virulence factor Annotation(s)

VF gene ID Occurences Protein VF ID Category
VFG000463 1 Gifsy-2 prophage: superoxide dismutase precursor (Cu-Zn) VF0109 Stress survival

Annotations of the 161 SwissProt hits

Annotation Number of occurrences
Copper chaperone for superoxide dismutase 4
Extracellular superoxide dismutase [Cu-Zn] 6
Extracellular superoxide dismutase [Cu-Zn] 2 1
Probable superoxide dismutase [Cu-Zn] 6 1
Putative superoxide dismutase [Cu-Zn] 2
Superoxide dismutase [Cu-Zn] 101
Superoxide dismutase [Cu-Zn] (Fragment) 8
Superoxide dismutase [Cu-Zn] 1 10
Superoxide dismutase [Cu-Zn] 2 8
Superoxide dismutase [Cu-Zn] 2, chloroplastic 1
Superoxide dismutase [Cu-Zn] 3 1
Superoxide dismutase [Cu-Zn] 4 1
Superoxide dismutase [Cu-Zn] 4A 1
Superoxide dismutase [Cu-Zn] 4AP 1
Superoxide dismutase [Cu-Zn] 5 1
Superoxide dismutase [Cu-Zn] A 1
Superoxide dismutase [Cu-Zn] B 1
Superoxide dismutase [Cu-Zn], chloroplastic 9
Superoxide dismutase [Cu-Zn], chloroplastic (Fragment) 1
Superoxide dismutase [Cu-Zn]-like 1
Superoxide dismutase-like protein YojM 1

Protein length

Unique protein length 174

Protein length distribution