Orthogroup:group_2906


Homologs in group_2906

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_13295 FBDBKF_13295 Morganella morganii S1 - Integrase-like protein
EHELCC_08800 EHELCC_08800 Morganella morganii S2 - Integrase-like protein
NLDBIP_09125 NLDBIP_09125 Morganella morganii S4 - Integrase-like protein
LHKJJB_05140 LHKJJB_05140 Morganella morganii S3 - Integrase-like protein
HKOGLL_05775 HKOGLL_05775 Morganella morganii S5 - Integrase-like protein
PMI_RS12305 PMI_RS12305 Proteus mirabilis HI4320 - integrase family protein

Distribution of group_2906 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2906 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2906

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_2906.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 6

Product

# Product Occurence
1 Integrase-like protein 5
2 integrase family protein 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0582 6 LX Replication, recombination and repair (L)
Mobilome: prophages, transposons (X)		 Integrase/recombinase, includes phage integrase

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00589 6 Phage integrase family
PF13356 6 Arm DNA-binding domain

Annotations of the 7 SwissProt hits

Annotation Number of occurrences
Integrase 3
Prophage integrase IntA 1
Prophage integrase IntS 1
Prophage integrase IntZ 1
Putative protein IntB 1

Protein length

Min length 407
Max length 413
Mean length (sd) 408.0 (2.4)
Median length 407.0

Protein length distribution