Orthogroup:group_2900


Homologs in group_2900

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6 homologs were identified in 2 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_12820 FBDBKF_12820 Morganella morganii S1 - lysis protein
PMI_RS02445 PMI_RS02445 Proteus mirabilis HI4320 - lysis protein
PMI_RS04515 PMI_RS04515 Proteus mirabilis HI4320 - lysis protein
PMI_RS04715 PMI_RS04715 Proteus mirabilis HI4320 - lysis protein
PMI_RS08435 PMI_RS08435 Proteus mirabilis HI4320 - lysis system i-spanin subunit Rz
PMI_RS09785 PMI_RS09785 Proteus mirabilis HI4320 - lysis protein

Distribution of group_2900 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2900 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2900

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_2900.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 6

Product

# Product Occurence
1 lysis protein 5
2 lysis system i-spanin subunit Rz 1

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K14744 6 prophage endopeptidase [EC:3.4.-.-] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF03245 6 Bacteriophage Rz lysis protein

Annotations of the 6 SwissProt hits

Annotation Number of occurrences
Prophage Rz endopeptidase RzpD 1
Putative endopeptidase RzpR 1
Spanin, inner membrane subunit 4

Protein length

Min length 149
Max length 167
Mean length (sd) 154.2 (6.6)
Median length 153.0

Protein length distribution