Orthogroup:group_2899


Homologs in group_2899

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6 homologs were identified in 2 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_12575 FBDBKF_12575 Morganella morganii S1 ygiQ Radical SAM superfamily enzyme YgiQ, UPF0313 family
FBDBKF_12580 FBDBKF_12580 Morganella morganii S1 ygiQ Radical SAM superfamily enzyme YgiQ, UPF0313 family
FBDBKF_12590 FBDBKF_12590 Morganella morganii S1 ygiQ Radical SAM superfamily enzyme YgiQ, UPF0313 family
F4V73_RS07810 F4V73_RS07810 Morganella psychrotolerans - radical SAM protein
F4V73_RS07815 F4V73_RS07815 Morganella psychrotolerans - radical SAM protein
F4V73_RS07825 F4V73_RS07825 Morganella psychrotolerans - radical SAM protein

Distribution of group_2899 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2899 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2899

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_2899.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 ygiQ 3
2 - 3

Product

# Product Occurence
1 Radical SAM superfamily enzyme YgiQ, UPF0313 family 3
2 radical SAM protein 3

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1032 6 R General function prediction only (R) Radical SAM superfamily enzyme YgiQ, UPF0313 family

Pfam domain Annotation(s)

Domain ID Occurences Description
PF04055 6 Radical SAM superfamily

Annotations of the 43 SwissProt hits

Annotation Number of occurrences
Anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase 4
Bacteriochlorophyllide d C-12(1)-methyltransferase 1
Bacteriochlorophyllide d C-8(2)-methyltransferase 1
Cytidylyl-2-hydroxyethylphosphonate methyltransferase 1
Hopanoid C-2 methylase 1
Hopanoid C-3 methylase 1
Probable threonylcarbamoyladenosine tRNA methylthiotransferase 1
Putative methylthiotransferase MJ0865 1
Ribosomal protein uS12 methylthiotransferase RimO 12
Threonylcarbamoyladenosine tRNA methylthiotransferase MtaB 1
Uncharacterized methyltransferase MJ1487 1
Uncharacterized methyltransferase PH0819 1
Uncharacterized methyltransferase sll1242 1
Uncharacterized methyltransferase slr0309 1
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase 15

Protein length

Min length 436
Max length 448
Mean length (sd) 444.8 (4.7)
Median length 447.0

Protein length distribution