Orthogroup:group_2842


Homologs in group_2842

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_10550 FBDBKF_10550 Morganella morganii S1 dctM TRAP-type C4-dicarboxylate transport system, small permease component YiaM
EHELCC_14885 EHELCC_14885 Morganella morganii S2 dctM TRAP-type C4-dicarboxylate transport system, small permease component YiaM
NLDBIP_14715 NLDBIP_14715 Morganella morganii S4 dctM TRAP-type C4-dicarboxylate transport system, small permease component YiaM
LHKJJB_14630 LHKJJB_14630 Morganella morganii S3 dctM TRAP-type C4-dicarboxylate transport system, small permease component YiaM
HKOGLL_13250 HKOGLL_13250 Morganella morganii S5 dctM TRAP-type C4-dicarboxylate transport system, small permease component YiaM
F4V73_RS14260 F4V73_RS14260 Morganella psychrotolerans - TRAP transporter small permease

Distribution of group_2842 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2842 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2842

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_2842.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 dctM 5
2 - 1

Product

# Product Occurence
1 TRAP-type C4-dicarboxylate transport system, small permease component YiaM 5
2 TRAP transporter small permease 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3090 6 G Carbohydrate transport and metabolism (G) TRAP-type C4-dicarboxylate transport system, small permease component YiaM

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K21394 6 TRAP-type transport system small permease protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF04290 6 Tripartite ATP-independent periplasmic transporters, DctQ component

Annotations of the 9 SwissProt hits

Annotation Number of occurrences
2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM 1
C4-dicarboxylate TRAP transporter small permease protein DctQ 1
Isethionate TRAP transporter permease protein DctMQ 1
Putative TRAP transporter small permease protein HI_0051 1
Putative TRAP transporter small permease protein HI_1030 1
Sialic acid TRAP transporter permease protein SiaT 3
Sialic acid TRAP transporter small permease protein SiaQ 1

Protein length

Unique protein length 167

Protein length distribution